The Summer School provides hands-on training in computational analysis of proteomics data generated by modern mass spectrometers. The practical parts will enable participants to perform sophisticated quantitative data analysis in their own future research using the publicly available MaxQuant and Perseus software.
MaxQuant Summer School 2022 in Barcelona
Date: September 5 - 9, 2022
Location: Centre de Cultura Contemporània de Barcelona
All talks will be uploaded to YouTube
Thank you to all participants, we hope to see you at the next Summerschool!
Location: Centre de Cultura Contemporània de Barcelona
All talks will be uploaded to YouTube
Thank you to all participants, we hope to see you at the next Summerschool!
Plenary speakers
Tamar Geiger
Weizmann Institute of Science
Albert J. R. Heck
Utrecht University
Paola Picotti
ETH Zürich
Maria Robles
LMU München (picture: courtesy of Jan Greune)
Schedule for time zone UTC-12
| Time/Day | Sunday, September 04 | Monday, September 05 | Tuesday, September 06 | Wednesday, September 07 | Thursday, September 08 | Friday, September 09 |
|---|---|---|---|---|---|---|
| 00:00 |
|
MaxQuant basics II
Pelagia Kyriakidou |
Spectrum prediction
Shamil Urazbakhtin |
Poster session |
Perseus intermediate tutorial
Juan Luis Restrepo-López |
Eduard Sabido |
| 00:45 |
|
Tamar Geiger | Albert Heck | Poster session | Paola Picotti |
Concluding remarks
Jürgen Cox |
| 01:30 |
|
Coffee break | Coffee break | Coffee break | ||
| 02:00 |
|
MaxQuant basics III
Dmitry Alexeev |
MaxQuant.Live
Christoph Wichmann |
Perseus plug-in programming tutorial
Daniela Ferretti |
||
| 02:45 |
|
LFQ Quantification
Christoph Wichmann |
Question session | Social activities |
PTMs
Şule Yilmaz-Rumpf |
|
| 03:30 |
|
Mini break | Mini break | Mini break | ||
| 03:45 |
|
Question session |
VR based molecular modelling
Nanome inc. |
Question session | ||
| 04:30 |
|
Wikipedia proteomics editathon
Antonio Hermoso |
Wikipedia proteomics editathon
Antonio Hermoso |
|||
| 06:00 |
|
Joint dinner | ||||
| 19:00 |
MaxDIA I
Jürgen Cox |
NGS
Bèla Frohn |
Output tables
Bèla Frohn |
Isobaric labelling tutorial
Daniela Ferretti |
|
|
| 19:45 |
Welcome
Jürgen Cox |
MaxDIA II
Jürgen Cox |
MaxQuant Atlas
Daniela Ferretti |
De novo sequencing
Dmitry Alexeev |
Perseus computational PTM tutorial
Şule Yilmaz-Rumpf |
|
| 20:30 | Coffee break | Coffee break | Coffee break | Coffee break | Coffee break |
|
| 21:00 |
Typical proteomics experiments
Pelagia Kyriakidou |
MaxQuant tutorial (DDA/DIA)
Hamid Hamzeiy |
Maria Robles |
Perseus introduction
Jürgen Cox |
Perseus interactions & networks tutorial
Carlo De Nart |
|
| 21:45 |
MaxQuant basics I
Pelagia Kyriakidou |
Isobaric labelling theory
Hamid Hamzeiy |
Perseus basic tutorial
Carlo De Nart |
Cross linking
Şule Yilmaz-Rumpf |
|
|
| 22:30 | Lunch Break | Lunch break | Lunch break | Lunch break | Lunch break |
|
| 23:30 | Poster session | Poster session | Poster session | Poster session | Poster session |
|
Schedule for time zone UTC-11
| Time/Day | Sunday, September 04 | Monday, September 05 | Tuesday, September 06 | Wednesday, September 07 | Thursday, September 08 | Friday, September 09 |
|---|---|---|---|---|---|---|
| 00:30 |
|
Poster session | Poster session | Poster session | Poster session | Poster session |
| 01:00 |
|
MaxQuant basics II
Pelagia Kyriakidou |
Spectrum prediction
Shamil Urazbakhtin |
Poster session |
Perseus intermediate tutorial
Juan Luis Restrepo-López |
Eduard Sabido |
| 01:45 |
|
Tamar Geiger | Albert Heck | Poster session | Paola Picotti |
Concluding remarks
Jürgen Cox |
| 02:30 |
|
Coffee break | Coffee break | Coffee break | ||
| 03:00 |
|
MaxQuant basics III
Dmitry Alexeev |
MaxQuant.Live
Christoph Wichmann |
Perseus plug-in programming tutorial
Daniela Ferretti |
||
| 03:45 |
|
LFQ Quantification
Christoph Wichmann |
Question session | Social activities |
PTMs
Şule Yilmaz-Rumpf |
|
| 04:30 |
|
Mini break | Mini break | Mini break | ||
| 04:45 |
|
Question session |
VR based molecular modelling
Nanome inc. |
Question session | ||
| 05:30 |
|
Wikipedia proteomics editathon
Antonio Hermoso |
Wikipedia proteomics editathon
Antonio Hermoso |
|||
| 07:00 |
|
Joint dinner | ||||
| 20:00 |
MaxDIA I
Jürgen Cox |
NGS
Bèla Frohn |
Output tables
Bèla Frohn |
Isobaric labelling tutorial
Daniela Ferretti |
|
|
| 20:45 |
Welcome
Jürgen Cox |
MaxDIA II
Jürgen Cox |
MaxQuant Atlas
Daniela Ferretti |
De novo sequencing
Dmitry Alexeev |
Perseus computational PTM tutorial
Şule Yilmaz-Rumpf |
|
| 21:30 | Coffee break | Coffee break | Coffee break | Coffee break | Coffee break |
|
| 22:00 |
Typical proteomics experiments
Pelagia Kyriakidou |
MaxQuant tutorial (DDA/DIA)
Hamid Hamzeiy |
Maria Robles |
Perseus introduction
Jürgen Cox |
Perseus interactions & networks tutorial
Carlo De Nart |
|
| 22:45 |
MaxQuant basics I
Pelagia Kyriakidou |
Isobaric labelling theory
Hamid Hamzeiy |
Perseus basic tutorial
Carlo De Nart |
Cross linking
Şule Yilmaz-Rumpf |
|
|
| 23:30 | Lunch Break | Lunch break | Lunch break | Lunch break | Lunch break |
|
Schedule for time zone UTC-10
| Time/Day | Sunday, September 04 | Monday, September 05 | Tuesday, September 06 | Wednesday, September 07 | Thursday, September 08 | Friday, September 09 |
|---|---|---|---|---|---|---|
| 00:30 |
|
Lunch Break | Lunch break | Lunch break | Lunch break | Lunch break |
| 01:30 |
|
Poster session | Poster session | Poster session | Poster session | Poster session |
| 02:00 |
|
MaxQuant basics II
Pelagia Kyriakidou |
Spectrum prediction
Shamil Urazbakhtin |
Poster session |
Perseus intermediate tutorial
Juan Luis Restrepo-López |
Eduard Sabido |
| 02:45 |
|
Tamar Geiger | Albert Heck | Poster session | Paola Picotti |
Concluding remarks
Jürgen Cox |
| 03:30 |
|
Coffee break | Coffee break | Coffee break | ||
| 04:00 |
|
MaxQuant basics III
Dmitry Alexeev |
MaxQuant.Live
Christoph Wichmann |
Perseus plug-in programming tutorial
Daniela Ferretti |
||
| 04:45 |
|
LFQ Quantification
Christoph Wichmann |
Question session | Social activities |
PTMs
Şule Yilmaz-Rumpf |
|
| 05:30 |
|
Mini break | Mini break | Mini break | ||
| 05:45 |
|
Question session |
VR based molecular modelling
Nanome inc. |
Question session | ||
| 06:30 |
|
Wikipedia proteomics editathon
Antonio Hermoso |
Wikipedia proteomics editathon
Antonio Hermoso |
|||
| 08:00 |
|
Joint dinner | ||||
| 21:00 |
MaxDIA I
Jürgen Cox |
NGS
Bèla Frohn |
Output tables
Bèla Frohn |
Isobaric labelling tutorial
Daniela Ferretti |
|
|
| 21:45 |
Welcome
Jürgen Cox |
MaxDIA II
Jürgen Cox |
MaxQuant Atlas
Daniela Ferretti |
De novo sequencing
Dmitry Alexeev |
Perseus computational PTM tutorial
Şule Yilmaz-Rumpf |
|
| 22:30 | Coffee break | Coffee break | Coffee break | Coffee break | Coffee break |
|
| 23:00 |
Typical proteomics experiments
Pelagia Kyriakidou |
MaxQuant tutorial (DDA/DIA)
Hamid Hamzeiy |
Maria Robles |
Perseus introduction
Jürgen Cox |
Perseus interactions & networks tutorial
Carlo De Nart |
|
| 23:45 |
MaxQuant basics I
Pelagia Kyriakidou |
Isobaric labelling theory
Hamid Hamzeiy |
Perseus basic tutorial
Carlo De Nart |
Cross linking
Şule Yilmaz-Rumpf |
|
Schedule for time zone UTC-9
| Time/Day | Sunday, September 04 | Monday, September 05 | Tuesday, September 06 | Wednesday, September 07 | Thursday, September 08 | Friday, September 09 |
|---|---|---|---|---|---|---|
| 00:00 |
|
Typical proteomics experiments
Pelagia Kyriakidou |
MaxQuant tutorial (DDA/DIA)
Hamid Hamzeiy |
Maria Robles |
Perseus introduction
Jürgen Cox |
Perseus interactions & networks tutorial
Carlo De Nart |
| 00:45 |
|
MaxQuant basics I
Pelagia Kyriakidou |
Isobaric labelling theory
Hamid Hamzeiy |
Perseus basic tutorial
Carlo De Nart |
Cross linking
Şule Yilmaz-Rumpf |
|
| 01:30 |
|
Lunch Break | Lunch break | Lunch break | Lunch break | Lunch break |
| 02:30 |
|
Poster session | Poster session | Poster session | Poster session | Poster session |
| 03:00 |
|
MaxQuant basics II
Pelagia Kyriakidou |
Spectrum prediction
Shamil Urazbakhtin |
Poster session |
Perseus intermediate tutorial
Juan Luis Restrepo-López |
Eduard Sabido |
| 03:45 |
|
Tamar Geiger | Albert Heck | Poster session | Paola Picotti |
Concluding remarks
Jürgen Cox |
| 04:30 |
|
Coffee break | Coffee break | Coffee break | ||
| 05:00 |
|
MaxQuant basics III
Dmitry Alexeev |
MaxQuant.Live
Christoph Wichmann |
Perseus plug-in programming tutorial
Daniela Ferretti |
||
| 05:45 |
|
LFQ Quantification
Christoph Wichmann |
Question session | Social activities |
PTMs
Şule Yilmaz-Rumpf |
|
| 06:30 |
|
Mini break | Mini break | Mini break | ||
| 06:45 |
|
Question session |
VR based molecular modelling
Nanome inc. |
Question session | ||
| 07:30 |
|
Wikipedia proteomics editathon
Antonio Hermoso |
Wikipedia proteomics editathon
Antonio Hermoso |
|||
| 09:00 |
|
Joint dinner | ||||
| 22:00 |
MaxDIA I
Jürgen Cox |
NGS
Bèla Frohn |
Output tables
Bèla Frohn |
Isobaric labelling tutorial
Daniela Ferretti |
|
|
| 22:45 |
Welcome
Jürgen Cox |
MaxDIA II
Jürgen Cox |
MaxQuant Atlas
Daniela Ferretti |
De novo sequencing
Dmitry Alexeev |
Perseus computational PTM tutorial
Şule Yilmaz-Rumpf |
|
| 23:30 | Coffee break | Coffee break | Coffee break | Coffee break | Coffee break |
|
Schedule for time zone UTC-8
| Time/Day | Sunday, September 04 | Monday, September 05 | Tuesday, September 06 | Wednesday, September 07 | Thursday, September 08 | Friday, September 09 |
|---|---|---|---|---|---|---|
| 00:30 |
|
Coffee break | Coffee break | Coffee break | Coffee break | Coffee break |
| 01:00 |
|
Typical proteomics experiments
Pelagia Kyriakidou |
MaxQuant tutorial (DDA/DIA)
Hamid Hamzeiy |
Maria Robles |
Perseus introduction
Jürgen Cox |
Perseus interactions & networks tutorial
Carlo De Nart |
| 01:45 |
|
MaxQuant basics I
Pelagia Kyriakidou |
Isobaric labelling theory
Hamid Hamzeiy |
Perseus basic tutorial
Carlo De Nart |
Cross linking
Şule Yilmaz-Rumpf |
|
| 02:30 |
|
Lunch Break | Lunch break | Lunch break | Lunch break | Lunch break |
| 03:30 |
|
Poster session | Poster session | Poster session | Poster session | Poster session |
| 04:00 |
|
MaxQuant basics II
Pelagia Kyriakidou |
Spectrum prediction
Shamil Urazbakhtin |
Poster session |
Perseus intermediate tutorial
Juan Luis Restrepo-López |
Eduard Sabido |
| 04:45 |
|
Tamar Geiger | Albert Heck | Poster session | Paola Picotti |
Concluding remarks
Jürgen Cox |
| 05:30 |
|
Coffee break | Coffee break | Coffee break | ||
| 06:00 |
|
MaxQuant basics III
Dmitry Alexeev |
MaxQuant.Live
Christoph Wichmann |
Perseus plug-in programming tutorial
Daniela Ferretti |
||
| 06:45 |
|
LFQ Quantification
Christoph Wichmann |
Question session | Social activities |
PTMs
Şule Yilmaz-Rumpf |
|
| 07:30 |
|
Mini break | Mini break | Mini break | ||
| 07:45 |
|
Question session |
VR based molecular modelling
Nanome inc. |
Question session | ||
| 08:30 |
|
Wikipedia proteomics editathon
Antonio Hermoso |
Wikipedia proteomics editathon
Antonio Hermoso |
|||
| 10:00 |
|
Joint dinner | ||||
| 23:00 |
MaxDIA I
Jürgen Cox |
NGS
Bèla Frohn |
Output tables
Bèla Frohn |
Isobaric labelling tutorial
Daniela Ferretti |
|
|
| 23:45 |
Welcome
Jürgen Cox |
MaxDIA II
Jürgen Cox |
MaxQuant Atlas
Daniela Ferretti |
De novo sequencing
Dmitry Alexeev |
Perseus computational PTM tutorial
Şule Yilmaz-Rumpf |
|
Schedule for time zone UTC-7
| Time/Day | Monday, September 05 | Tuesday, September 06 | Wednesday, September 07 | Thursday, September 08 | Friday, September 09 |
|---|---|---|---|---|---|
| 00:00 |
MaxDIA I
Jürgen Cox |
NGS
Bèla Frohn |
Output tables
Bèla Frohn |
Isobaric labelling tutorial
Daniela Ferretti |
|
| 00:45 |
Welcome
Jürgen Cox |
MaxDIA II
Jürgen Cox |
MaxQuant Atlas
Daniela Ferretti |
De novo sequencing
Dmitry Alexeev |
Perseus computational PTM tutorial
Şule Yilmaz-Rumpf |
| 01:30 | Coffee break | Coffee break | Coffee break | Coffee break | Coffee break |
| 02:00 |
Typical proteomics experiments
Pelagia Kyriakidou |
MaxQuant tutorial (DDA/DIA)
Hamid Hamzeiy |
Maria Robles |
Perseus introduction
Jürgen Cox |
Perseus interactions & networks tutorial
Carlo De Nart |
| 02:45 |
MaxQuant basics I
Pelagia Kyriakidou |
Isobaric labelling theory
Hamid Hamzeiy |
Perseus basic tutorial
Carlo De Nart |
Cross linking
Şule Yilmaz-Rumpf |
|
| 03:30 | Lunch Break | Lunch break | Lunch break | Lunch break | Lunch break |
| 04:30 | Poster session | Poster session | Poster session | Poster session | Poster session |
| 05:00 |
MaxQuant basics II
Pelagia Kyriakidou |
Spectrum prediction
Shamil Urazbakhtin |
Poster session |
Perseus intermediate tutorial
Juan Luis Restrepo-López |
Eduard Sabido |
| 05:45 | Tamar Geiger | Albert Heck | Poster session | Paola Picotti |
Concluding remarks
Jürgen Cox |
| 06:30 | Coffee break | Coffee break | Coffee break | ||
| 07:00 |
MaxQuant basics III
Dmitry Alexeev |
MaxQuant.Live
Christoph Wichmann |
Perseus plug-in programming tutorial
Daniela Ferretti |
||
| 07:45 |
LFQ Quantification
Christoph Wichmann |
Question session | Social activities |
PTMs
Şule Yilmaz-Rumpf |
|
| 08:30 | Mini break | Mini break | Mini break | ||
| 08:45 | Question session |
VR based molecular modelling
Nanome inc. |
Question session | ||
| 09:30 |
Wikipedia proteomics editathon
Antonio Hermoso |
Wikipedia proteomics editathon
Antonio Hermoso |
|||
| 11:00 | Joint dinner |
Schedule for time zone UTC-6
| Time/Day | Monday, September 05 | Tuesday, September 06 | Wednesday, September 07 | Thursday, September 08 | Friday, September 09 |
|---|---|---|---|---|---|
| 01:00 |
MaxDIA I
Jürgen Cox |
NGS
Bèla Frohn |
Output tables
Bèla Frohn |
Isobaric labelling tutorial
Daniela Ferretti |
|
| 01:45 |
Welcome
Jürgen Cox |
MaxDIA II
Jürgen Cox |
MaxQuant Atlas
Daniela Ferretti |
De novo sequencing
Dmitry Alexeev |
Perseus computational PTM tutorial
Şule Yilmaz-Rumpf |
| 02:30 | Coffee break | Coffee break | Coffee break | Coffee break | Coffee break |
| 03:00 |
Typical proteomics experiments
Pelagia Kyriakidou |
MaxQuant tutorial (DDA/DIA)
Hamid Hamzeiy |
Maria Robles |
Perseus introduction
Jürgen Cox |
Perseus interactions & networks tutorial
Carlo De Nart |
| 03:45 |
MaxQuant basics I
Pelagia Kyriakidou |
Isobaric labelling theory
Hamid Hamzeiy |
Perseus basic tutorial
Carlo De Nart |
Cross linking
Şule Yilmaz-Rumpf |
|
| 04:30 | Lunch Break | Lunch break | Lunch break | Lunch break | Lunch break |
| 05:30 | Poster session | Poster session | Poster session | Poster session | Poster session |
| 06:00 |
MaxQuant basics II
Pelagia Kyriakidou |
Spectrum prediction
Shamil Urazbakhtin |
Poster session |
Perseus intermediate tutorial
Juan Luis Restrepo-López |
Eduard Sabido |
| 06:45 | Tamar Geiger | Albert Heck | Poster session | Paola Picotti |
Concluding remarks
Jürgen Cox |
| 07:30 | Coffee break | Coffee break | Coffee break | ||
| 08:00 |
MaxQuant basics III
Dmitry Alexeev |
MaxQuant.Live
Christoph Wichmann |
Perseus plug-in programming tutorial
Daniela Ferretti |
||
| 08:45 |
LFQ Quantification
Christoph Wichmann |
Question session | Social activities |
PTMs
Şule Yilmaz-Rumpf |
|
| 09:30 | Mini break | Mini break | Mini break | ||
| 09:45 | Question session |
VR based molecular modelling
Nanome inc. |
Question session | ||
| 10:30 |
Wikipedia proteomics editathon
Antonio Hermoso |
Wikipedia proteomics editathon
Antonio Hermoso |
|||
| 12:00 | Joint dinner |
Schedule for time zone UTC-5
| Time/Day | Monday, September 05 | Tuesday, September 06 | Wednesday, September 07 | Thursday, September 08 | Friday, September 09 |
|---|---|---|---|---|---|
| 02:00 |
MaxDIA I
Jürgen Cox |
NGS
Bèla Frohn |
Output tables
Bèla Frohn |
Isobaric labelling tutorial
Daniela Ferretti |
|
| 02:45 |
Welcome
Jürgen Cox |
MaxDIA II
Jürgen Cox |
MaxQuant Atlas
Daniela Ferretti |
De novo sequencing
Dmitry Alexeev |
Perseus computational PTM tutorial
Şule Yilmaz-Rumpf |
| 03:30 | Coffee break | Coffee break | Coffee break | Coffee break | Coffee break |
| 04:00 |
Typical proteomics experiments
Pelagia Kyriakidou |
MaxQuant tutorial (DDA/DIA)
Hamid Hamzeiy |
Maria Robles |
Perseus introduction
Jürgen Cox |
Perseus interactions & networks tutorial
Carlo De Nart |
| 04:45 |
MaxQuant basics I
Pelagia Kyriakidou |
Isobaric labelling theory
Hamid Hamzeiy |
Perseus basic tutorial
Carlo De Nart |
Cross linking
Şule Yilmaz-Rumpf |
|
| 05:30 | Lunch Break | Lunch break | Lunch break | Lunch break | Lunch break |
| 06:30 | Poster session | Poster session | Poster session | Poster session | Poster session |
| 07:00 |
MaxQuant basics II
Pelagia Kyriakidou |
Spectrum prediction
Shamil Urazbakhtin |
Poster session |
Perseus intermediate tutorial
Juan Luis Restrepo-López |
Eduard Sabido |
| 07:45 | Tamar Geiger | Albert Heck | Poster session | Paola Picotti |
Concluding remarks
Jürgen Cox |
| 08:30 | Coffee break | Coffee break | Coffee break | ||
| 09:00 |
MaxQuant basics III
Dmitry Alexeev |
MaxQuant.Live
Christoph Wichmann |
Perseus plug-in programming tutorial
Daniela Ferretti |
||
| 09:45 |
LFQ Quantification
Christoph Wichmann |
Question session | Social activities |
PTMs
Şule Yilmaz-Rumpf |
|
| 10:30 | Mini break | Mini break | Mini break | ||
| 10:45 | Question session |
VR based molecular modelling
Nanome inc. |
Question session | ||
| 11:30 |
Wikipedia proteomics editathon
Antonio Hermoso |
Wikipedia proteomics editathon
Antonio Hermoso |
|||
| 13:00 | Joint dinner |
Schedule for time zone UTC-4
| Time/Day | Monday, September 05 | Tuesday, September 06 | Wednesday, September 07 | Thursday, September 08 | Friday, September 09 |
|---|---|---|---|---|---|
| 03:00 |
MaxDIA I
Jürgen Cox |
NGS
Bèla Frohn |
Output tables
Bèla Frohn |
Isobaric labelling tutorial
Daniela Ferretti |
|
| 03:45 |
Welcome
Jürgen Cox |
MaxDIA II
Jürgen Cox |
MaxQuant Atlas
Daniela Ferretti |
De novo sequencing
Dmitry Alexeev |
Perseus computational PTM tutorial
Şule Yilmaz-Rumpf |
| 04:30 | Coffee break | Coffee break | Coffee break | Coffee break | Coffee break |
| 05:00 |
Typical proteomics experiments
Pelagia Kyriakidou |
MaxQuant tutorial (DDA/DIA)
Hamid Hamzeiy |
Maria Robles |
Perseus introduction
Jürgen Cox |
Perseus interactions & networks tutorial
Carlo De Nart |
| 05:45 |
MaxQuant basics I
Pelagia Kyriakidou |
Isobaric labelling theory
Hamid Hamzeiy |
Perseus basic tutorial
Carlo De Nart |
Cross linking
Şule Yilmaz-Rumpf |
|
| 06:30 | Lunch Break | Lunch break | Lunch break | Lunch break | Lunch break |
| 07:30 | Poster session | Poster session | Poster session | Poster session | Poster session |
| 08:00 |
MaxQuant basics II
Pelagia Kyriakidou |
Spectrum prediction
Shamil Urazbakhtin |
Poster session |
Perseus intermediate tutorial
Juan Luis Restrepo-López |
Eduard Sabido |
| 08:45 | Tamar Geiger | Albert Heck | Poster session | Paola Picotti |
Concluding remarks
Jürgen Cox |
| 09:30 | Coffee break | Coffee break | Coffee break | ||
| 10:00 |
MaxQuant basics III
Dmitry Alexeev |
MaxQuant.Live
Christoph Wichmann |
Perseus plug-in programming tutorial
Daniela Ferretti |
||
| 10:45 |
LFQ Quantification
Christoph Wichmann |
Question session | Social activities |
PTMs
Şule Yilmaz-Rumpf |
|
| 11:30 | Mini break | Mini break | Mini break | ||
| 11:45 | Question session |
VR based molecular modelling
Nanome inc. |
Question session | ||
| 12:30 |
Wikipedia proteomics editathon
Antonio Hermoso |
Wikipedia proteomics editathon
Antonio Hermoso |
|||
| 14:00 | Joint dinner |
Schedule for time zone UTC-3
| Time/Day | Monday, September 05 | Tuesday, September 06 | Wednesday, September 07 | Thursday, September 08 | Friday, September 09 |
|---|---|---|---|---|---|
| 04:00 |
MaxDIA I
Jürgen Cox |
NGS
Bèla Frohn |
Output tables
Bèla Frohn |
Isobaric labelling tutorial
Daniela Ferretti |
|
| 04:45 |
Welcome
Jürgen Cox |
MaxDIA II
Jürgen Cox |
MaxQuant Atlas
Daniela Ferretti |
De novo sequencing
Dmitry Alexeev |
Perseus computational PTM tutorial
Şule Yilmaz-Rumpf |
| 05:30 | Coffee break | Coffee break | Coffee break | Coffee break | Coffee break |
| 06:00 |
Typical proteomics experiments
Pelagia Kyriakidou |
MaxQuant tutorial (DDA/DIA)
Hamid Hamzeiy |
Maria Robles |
Perseus introduction
Jürgen Cox |
Perseus interactions & networks tutorial
Carlo De Nart |
| 06:45 |
MaxQuant basics I
Pelagia Kyriakidou |
Isobaric labelling theory
Hamid Hamzeiy |
Perseus basic tutorial
Carlo De Nart |
Cross linking
Şule Yilmaz-Rumpf |
|
| 07:30 | Lunch Break | Lunch break | Lunch break | Lunch break | Lunch break |
| 08:30 | Poster session | Poster session | Poster session | Poster session | Poster session |
| 09:00 |
MaxQuant basics II
Pelagia Kyriakidou |
Spectrum prediction
Shamil Urazbakhtin |
Poster session |
Perseus intermediate tutorial
Juan Luis Restrepo-López |
Eduard Sabido |
| 09:45 | Tamar Geiger | Albert Heck | Poster session | Paola Picotti |
Concluding remarks
Jürgen Cox |
| 10:30 | Coffee break | Coffee break | Coffee break | ||
| 11:00 |
MaxQuant basics III
Dmitry Alexeev |
MaxQuant.Live
Christoph Wichmann |
Perseus plug-in programming tutorial
Daniela Ferretti |
||
| 11:45 |
LFQ Quantification
Christoph Wichmann |
Question session | Social activities |
PTMs
Şule Yilmaz-Rumpf |
|
| 12:30 | Mini break | Mini break | Mini break | ||
| 12:45 | Question session |
VR based molecular modelling
Nanome inc. |
Question session | ||
| 13:30 |
Wikipedia proteomics editathon
Antonio Hermoso |
Wikipedia proteomics editathon
Antonio Hermoso |
|||
| 15:00 | Joint dinner |
Schedule for time zone UTC-2
| Time/Day | Monday, September 05 | Tuesday, September 06 | Wednesday, September 07 | Thursday, September 08 | Friday, September 09 |
|---|---|---|---|---|---|
| 05:00 |
MaxDIA I
Jürgen Cox |
NGS
Bèla Frohn |
Output tables
Bèla Frohn |
Isobaric labelling tutorial
Daniela Ferretti |
|
| 05:45 |
Welcome
Jürgen Cox |
MaxDIA II
Jürgen Cox |
MaxQuant Atlas
Daniela Ferretti |
De novo sequencing
Dmitry Alexeev |
Perseus computational PTM tutorial
Şule Yilmaz-Rumpf |
| 06:30 | Coffee break | Coffee break | Coffee break | Coffee break | Coffee break |
| 07:00 |
Typical proteomics experiments
Pelagia Kyriakidou |
MaxQuant tutorial (DDA/DIA)
Hamid Hamzeiy |
Maria Robles |
Perseus introduction
Jürgen Cox |
Perseus interactions & networks tutorial
Carlo De Nart |
| 07:45 |
MaxQuant basics I
Pelagia Kyriakidou |
Isobaric labelling theory
Hamid Hamzeiy |
Perseus basic tutorial
Carlo De Nart |
Cross linking
Şule Yilmaz-Rumpf |
|
| 08:30 | Lunch Break | Lunch break | Lunch break | Lunch break | Lunch break |
| 09:30 | Poster session | Poster session | Poster session | Poster session | Poster session |
| 10:00 |
MaxQuant basics II
Pelagia Kyriakidou |
Spectrum prediction
Shamil Urazbakhtin |
Poster session |
Perseus intermediate tutorial
Juan Luis Restrepo-López |
Eduard Sabido |
| 10:45 | Tamar Geiger | Albert Heck | Poster session | Paola Picotti |
Concluding remarks
Jürgen Cox |
| 11:30 | Coffee break | Coffee break | Coffee break | ||
| 12:00 |
MaxQuant basics III
Dmitry Alexeev |
MaxQuant.Live
Christoph Wichmann |
Perseus plug-in programming tutorial
Daniela Ferretti |
||
| 12:45 |
LFQ Quantification
Christoph Wichmann |
Question session | Social activities |
PTMs
Şule Yilmaz-Rumpf |
|
| 13:30 | Mini break | Mini break | Mini break | ||
| 13:45 | Question session |
VR based molecular modelling
Nanome inc. |
Question session | ||
| 14:30 |
Wikipedia proteomics editathon
Antonio Hermoso |
Wikipedia proteomics editathon
Antonio Hermoso |
|||
| 16:00 | Joint dinner |
Schedule for time zone UTC-1
| Time/Day | Monday, September 05 | Tuesday, September 06 | Wednesday, September 07 | Thursday, September 08 | Friday, September 09 |
|---|---|---|---|---|---|
| 06:00 |
MaxDIA I
Jürgen Cox |
NGS
Bèla Frohn |
Output tables
Bèla Frohn |
Isobaric labelling tutorial
Daniela Ferretti |
|
| 06:45 |
Welcome
Jürgen Cox |
MaxDIA II
Jürgen Cox |
MaxQuant Atlas
Daniela Ferretti |
De novo sequencing
Dmitry Alexeev |
Perseus computational PTM tutorial
Şule Yilmaz-Rumpf |
| 07:30 | Coffee break | Coffee break | Coffee break | Coffee break | Coffee break |
| 08:00 |
Typical proteomics experiments
Pelagia Kyriakidou |
MaxQuant tutorial (DDA/DIA)
Hamid Hamzeiy |
Maria Robles |
Perseus introduction
Jürgen Cox |
Perseus interactions & networks tutorial
Carlo De Nart |
| 08:45 |
MaxQuant basics I
Pelagia Kyriakidou |
Isobaric labelling theory
Hamid Hamzeiy |
Perseus basic tutorial
Carlo De Nart |
Cross linking
Şule Yilmaz-Rumpf |
|
| 09:30 | Lunch Break | Lunch break | Lunch break | Lunch break | Lunch break |
| 10:30 | Poster session | Poster session | Poster session | Poster session | Poster session |
| 11:00 |
MaxQuant basics II
Pelagia Kyriakidou |
Spectrum prediction
Shamil Urazbakhtin |
Poster session |
Perseus intermediate tutorial
Juan Luis Restrepo-López |
Eduard Sabido |
| 11:45 | Tamar Geiger | Albert Heck | Poster session | Paola Picotti |
Concluding remarks
Jürgen Cox |
| 12:30 | Coffee break | Coffee break | Coffee break | ||
| 13:00 |
MaxQuant basics III
Dmitry Alexeev |
MaxQuant.Live
Christoph Wichmann |
Perseus plug-in programming tutorial
Daniela Ferretti |
||
| 13:45 |
LFQ Quantification
Christoph Wichmann |
Question session | Social activities |
PTMs
Şule Yilmaz-Rumpf |
|
| 14:30 | Mini break | Mini break | Mini break | ||
| 14:45 | Question session |
VR based molecular modelling
Nanome inc. |
Question session | ||
| 15:30 |
Wikipedia proteomics editathon
Antonio Hermoso |
Wikipedia proteomics editathon
Antonio Hermoso |
|||
| 17:00 | Joint dinner |
Schedule for time zone UTC+0
| Time/Day | Monday, September 05 | Tuesday, September 06 | Wednesday, September 07 | Thursday, September 08 | Friday, September 09 |
|---|---|---|---|---|---|
| 07:00 |
MaxDIA I
Jürgen Cox |
NGS
Bèla Frohn |
Output tables
Bèla Frohn |
Isobaric labelling tutorial
Daniela Ferretti |
|
| 07:45 |
Welcome
Jürgen Cox |
MaxDIA II
Jürgen Cox |
MaxQuant Atlas
Daniela Ferretti |
De novo sequencing
Dmitry Alexeev |
Perseus computational PTM tutorial
Şule Yilmaz-Rumpf |
| 08:30 | Coffee break | Coffee break | Coffee break | Coffee break | Coffee break |
| 09:00 |
Typical proteomics experiments
Pelagia Kyriakidou |
MaxQuant tutorial (DDA/DIA)
Hamid Hamzeiy |
Maria Robles |
Perseus introduction
Jürgen Cox |
Perseus interactions & networks tutorial
Carlo De Nart |
| 09:45 |
MaxQuant basics I
Pelagia Kyriakidou |
Isobaric labelling theory
Hamid Hamzeiy |
Perseus basic tutorial
Carlo De Nart |
Cross linking
Şule Yilmaz-Rumpf |
|
| 10:30 | Lunch Break | Lunch break | Lunch break | Lunch break | Lunch break |
| 11:30 | Poster session | Poster session | Poster session | Poster session | Poster session |
| 12:00 |
MaxQuant basics II
Pelagia Kyriakidou |
Spectrum prediction
Shamil Urazbakhtin |
Poster session |
Perseus intermediate tutorial
Juan Luis Restrepo-López |
Eduard Sabido |
| 12:45 | Tamar Geiger | Albert Heck | Poster session | Paola Picotti |
Concluding remarks
Jürgen Cox |
| 13:30 | Coffee break | Coffee break | Coffee break | ||
| 14:00 |
MaxQuant basics III
Dmitry Alexeev |
MaxQuant.Live
Christoph Wichmann |
Perseus plug-in programming tutorial
Daniela Ferretti |
||
| 14:45 |
LFQ Quantification
Christoph Wichmann |
Question session | Social activities |
PTMs
Şule Yilmaz-Rumpf |
|
| 15:30 | Mini break | Mini break | Mini break | ||
| 15:45 | Question session |
VR based molecular modelling
Nanome inc. |
Question session | ||
| 16:30 |
Wikipedia proteomics editathon
Antonio Hermoso |
Wikipedia proteomics editathon
Antonio Hermoso |
|||
| 18:00 | Joint dinner |
Schedule for time zone UTC+1
| Time/Day | Monday, September 05 | Tuesday, September 06 | Wednesday, September 07 | Thursday, September 08 | Friday, September 09 |
|---|---|---|---|---|---|
| 08:00 |
MaxDIA I
Jürgen Cox |
NGS
Bèla Frohn |
Output tables
Bèla Frohn |
Isobaric labelling tutorial
Daniela Ferretti |
|
| 08:45 |
Welcome
Jürgen Cox |
MaxDIA II
Jürgen Cox |
MaxQuant Atlas
Daniela Ferretti |
De novo sequencing
Dmitry Alexeev |
Perseus computational PTM tutorial
Şule Yilmaz-Rumpf |
| 09:30 | Coffee break | Coffee break | Coffee break | Coffee break | Coffee break |
| 10:00 |
Typical proteomics experiments
Pelagia Kyriakidou |
MaxQuant tutorial (DDA/DIA)
Hamid Hamzeiy |
Maria Robles |
Perseus introduction
Jürgen Cox |
Perseus interactions & networks tutorial
Carlo De Nart |
| 10:45 |
MaxQuant basics I
Pelagia Kyriakidou |
Isobaric labelling theory
Hamid Hamzeiy |
Perseus basic tutorial
Carlo De Nart |
Cross linking
Şule Yilmaz-Rumpf |
|
| 11:30 | Lunch Break | Lunch break | Lunch break | Lunch break | Lunch break |
| 12:30 | Poster session | Poster session | Poster session | Poster session | Poster session |
| 13:00 |
MaxQuant basics II
Pelagia Kyriakidou |
Spectrum prediction
Shamil Urazbakhtin |
Poster session |
Perseus intermediate tutorial
Juan Luis Restrepo-López |
Eduard Sabido |
| 13:45 | Tamar Geiger | Albert Heck | Poster session | Paola Picotti |
Concluding remarks
Jürgen Cox |
| 14:30 | Coffee break | Coffee break | Coffee break | ||
| 15:00 |
MaxQuant basics III
Dmitry Alexeev |
MaxQuant.Live
Christoph Wichmann |
Perseus plug-in programming tutorial
Daniela Ferretti |
||
| 15:45 |
LFQ Quantification
Christoph Wichmann |
Question session | Social activities |
PTMs
Şule Yilmaz-Rumpf |
|
| 16:30 | Mini break | Mini break | Mini break | ||
| 16:45 | Question session |
VR based molecular modelling
Nanome inc. |
Question session | ||
| 17:30 |
Wikipedia proteomics editathon
Antonio Hermoso |
Wikipedia proteomics editathon
Antonio Hermoso |
|||
| 19:00 | Joint dinner |
Schedule for time zone UTC+2
| Time/Day | Monday, September 05 | Tuesday, September 06 | Wednesday, September 07 | Thursday, September 08 | Friday, September 09 |
|---|---|---|---|---|---|
| 09:00 |
MaxDIA I
Jürgen Cox |
NGS
Bèla Frohn |
Output tables
Bèla Frohn |
Isobaric labelling tutorial
Daniela Ferretti |
|
| 09:45 |
Welcome
Jürgen Cox |
MaxDIA II
Jürgen Cox |
MaxQuant Atlas
Daniela Ferretti |
De novo sequencing
Dmitry Alexeev |
Perseus computational PTM tutorial
Şule Yilmaz-Rumpf |
| 10:30 | Coffee break | Coffee break | Coffee break | Coffee break | Coffee break |
| 11:00 |
Typical proteomics experiments
Pelagia Kyriakidou |
MaxQuant tutorial (DDA/DIA)
Hamid Hamzeiy |
Maria Robles |
Perseus introduction
Jürgen Cox |
Perseus interactions & networks tutorial
Carlo De Nart |
| 11:45 |
MaxQuant basics I
Pelagia Kyriakidou |
Isobaric labelling theory
Hamid Hamzeiy |
Perseus basic tutorial
Carlo De Nart |
Cross linking
Şule Yilmaz-Rumpf |
|
| 12:30 | Lunch Break | Lunch break | Lunch break | Lunch break | Lunch break |
| 13:30 | Poster session | Poster session | Poster session | Poster session | Poster session |
| 14:00 |
MaxQuant basics II
Pelagia Kyriakidou |
Spectrum prediction
Shamil Urazbakhtin |
Poster session |
Perseus intermediate tutorial
Juan Luis Restrepo-López |
Eduard Sabido |
| 14:45 | Tamar Geiger | Albert Heck | Poster session | Paola Picotti |
Concluding remarks
Jürgen Cox |
| 15:30 | Coffee break | Coffee break | Coffee break | ||
| 16:00 |
MaxQuant basics III
Dmitry Alexeev |
MaxQuant.Live
Christoph Wichmann |
Perseus plug-in programming tutorial
Daniela Ferretti |
||
| 16:45 |
LFQ Quantification
Christoph Wichmann |
Question session | Social activities |
PTMs
Şule Yilmaz-Rumpf |
|
| 17:30 | Mini break | Mini break | Mini break | ||
| 17:45 | Question session |
VR based molecular modelling
Nanome inc. |
Question session | ||
| 18:30 |
Wikipedia proteomics editathon
Antonio Hermoso |
Wikipedia proteomics editathon
Antonio Hermoso |
|||
| 20:00 | Joint dinner |
Schedule for time zone UTC+3
| Time/Day | Monday, September 05 | Tuesday, September 06 | Wednesday, September 07 | Thursday, September 08 | Friday, September 09 |
|---|---|---|---|---|---|
| 10:00 |
MaxDIA I
Jürgen Cox |
NGS
Bèla Frohn |
Output tables
Bèla Frohn |
Isobaric labelling tutorial
Daniela Ferretti |
|
| 10:45 |
Welcome
Jürgen Cox |
MaxDIA II
Jürgen Cox |
MaxQuant Atlas
Daniela Ferretti |
De novo sequencing
Dmitry Alexeev |
Perseus computational PTM tutorial
Şule Yilmaz-Rumpf |
| 11:30 | Coffee break | Coffee break | Coffee break | Coffee break | Coffee break |
| 12:00 |
Typical proteomics experiments
Pelagia Kyriakidou |
MaxQuant tutorial (DDA/DIA)
Hamid Hamzeiy |
Maria Robles |
Perseus introduction
Jürgen Cox |
Perseus interactions & networks tutorial
Carlo De Nart |
| 12:45 |
MaxQuant basics I
Pelagia Kyriakidou |
Isobaric labelling theory
Hamid Hamzeiy |
Perseus basic tutorial
Carlo De Nart |
Cross linking
Şule Yilmaz-Rumpf |
|
| 13:30 | Lunch Break | Lunch break | Lunch break | Lunch break | Lunch break |
| 14:30 | Poster session | Poster session | Poster session | Poster session | Poster session |
| 15:00 |
MaxQuant basics II
Pelagia Kyriakidou |
Spectrum prediction
Shamil Urazbakhtin |
Poster session |
Perseus intermediate tutorial
Juan Luis Restrepo-López |
Eduard Sabido |
| 15:45 | Tamar Geiger | Albert Heck | Poster session | Paola Picotti |
Concluding remarks
Jürgen Cox |
| 16:30 | Coffee break | Coffee break | Coffee break | ||
| 17:00 |
MaxQuant basics III
Dmitry Alexeev |
MaxQuant.Live
Christoph Wichmann |
Perseus plug-in programming tutorial
Daniela Ferretti |
||
| 17:45 |
LFQ Quantification
Christoph Wichmann |
Question session | Social activities |
PTMs
Şule Yilmaz-Rumpf |
|
| 18:30 | Mini break | Mini break | Mini break | ||
| 18:45 | Question session |
VR based molecular modelling
Nanome inc. |
Question session | ||
| 19:30 |
Wikipedia proteomics editathon
Antonio Hermoso |
Wikipedia proteomics editathon
Antonio Hermoso |
|||
| 21:00 | Joint dinner |
Schedule for time zone UTC+4
| Time/Day | Monday, September 05 | Tuesday, September 06 | Wednesday, September 07 | Thursday, September 08 | Friday, September 09 |
|---|---|---|---|---|---|
| 11:00 |
MaxDIA I
Jürgen Cox |
NGS
Bèla Frohn |
Output tables
Bèla Frohn |
Isobaric labelling tutorial
Daniela Ferretti |
|
| 11:45 |
Welcome
Jürgen Cox |
MaxDIA II
Jürgen Cox |
MaxQuant Atlas
Daniela Ferretti |
De novo sequencing
Dmitry Alexeev |
Perseus computational PTM tutorial
Şule Yilmaz-Rumpf |
| 12:30 | Coffee break | Coffee break | Coffee break | Coffee break | Coffee break |
| 13:00 |
Typical proteomics experiments
Pelagia Kyriakidou |
MaxQuant tutorial (DDA/DIA)
Hamid Hamzeiy |
Maria Robles |
Perseus introduction
Jürgen Cox |
Perseus interactions & networks tutorial
Carlo De Nart |
| 13:45 |
MaxQuant basics I
Pelagia Kyriakidou |
Isobaric labelling theory
Hamid Hamzeiy |
Perseus basic tutorial
Carlo De Nart |
Cross linking
Şule Yilmaz-Rumpf |
|
| 14:30 | Lunch Break | Lunch break | Lunch break | Lunch break | Lunch break |
| 15:30 | Poster session | Poster session | Poster session | Poster session | Poster session |
| 16:00 |
MaxQuant basics II
Pelagia Kyriakidou |
Spectrum prediction
Shamil Urazbakhtin |
Poster session |
Perseus intermediate tutorial
Juan Luis Restrepo-López |
Eduard Sabido |
| 16:45 | Tamar Geiger | Albert Heck | Poster session | Paola Picotti |
Concluding remarks
Jürgen Cox |
| 17:30 | Coffee break | Coffee break | Coffee break | ||
| 18:00 |
MaxQuant basics III
Dmitry Alexeev |
MaxQuant.Live
Christoph Wichmann |
Perseus plug-in programming tutorial
Daniela Ferretti |
||
| 18:45 |
LFQ Quantification
Christoph Wichmann |
Question session | Social activities |
PTMs
Şule Yilmaz-Rumpf |
|
| 19:30 | Mini break | Mini break | Mini break | ||
| 19:45 | Question session |
VR based molecular modelling
Nanome inc. |
Question session | ||
| 20:30 |
Wikipedia proteomics editathon
Antonio Hermoso |
Wikipedia proteomics editathon
Antonio Hermoso |
|||
| 22:00 | Joint dinner |
Schedule for time zone UTC+5
| Time/Day | Monday, September 05 | Tuesday, September 06 | Wednesday, September 07 | Thursday, September 08 | Friday, September 09 |
|---|---|---|---|---|---|
| 12:00 |
MaxDIA I
Jürgen Cox |
NGS
Bèla Frohn |
Output tables
Bèla Frohn |
Isobaric labelling tutorial
Daniela Ferretti |
|
| 12:45 |
Welcome
Jürgen Cox |
MaxDIA II
Jürgen Cox |
MaxQuant Atlas
Daniela Ferretti |
De novo sequencing
Dmitry Alexeev |
Perseus computational PTM tutorial
Şule Yilmaz-Rumpf |
| 13:30 | Coffee break | Coffee break | Coffee break | Coffee break | Coffee break |
| 14:00 |
Typical proteomics experiments
Pelagia Kyriakidou |
MaxQuant tutorial (DDA/DIA)
Hamid Hamzeiy |
Maria Robles |
Perseus introduction
Jürgen Cox |
Perseus interactions & networks tutorial
Carlo De Nart |
| 14:45 |
MaxQuant basics I
Pelagia Kyriakidou |
Isobaric labelling theory
Hamid Hamzeiy |
Perseus basic tutorial
Carlo De Nart |
Cross linking
Şule Yilmaz-Rumpf |
|
| 15:30 | Lunch Break | Lunch break | Lunch break | Lunch break | Lunch break |
| 16:30 | Poster session | Poster session | Poster session | Poster session | Poster session |
| 17:00 |
MaxQuant basics II
Pelagia Kyriakidou |
Spectrum prediction
Shamil Urazbakhtin |
Poster session |
Perseus intermediate tutorial
Juan Luis Restrepo-López |
Eduard Sabido |
| 17:45 | Tamar Geiger | Albert Heck | Poster session | Paola Picotti |
Concluding remarks
Jürgen Cox |
| 18:30 | Coffee break | Coffee break | Coffee break | ||
| 19:00 |
MaxQuant basics III
Dmitry Alexeev |
MaxQuant.Live
Christoph Wichmann |
Perseus plug-in programming tutorial
Daniela Ferretti |
||
| 19:45 |
LFQ Quantification
Christoph Wichmann |
Question session | Social activities |
PTMs
Şule Yilmaz-Rumpf |
|
| 20:30 | Mini break | Mini break | Mini break | ||
| 20:45 | Question session |
VR based molecular modelling
Nanome inc. |
Question session | ||
| 21:30 |
Wikipedia proteomics editathon
Antonio Hermoso |
Wikipedia proteomics editathon
Antonio Hermoso |
|||
| 23:00 | Joint dinner |
Schedule for time zone UTC+6
| Time/Day | Monday, September 05 | Tuesday, September 06 | Wednesday, September 07 | Thursday, September 08 | Friday, September 09 | Saturday, September 10 |
|---|---|---|---|---|---|---|
| 00:00 |
|
Joint dinner | ||||
| 13:00 |
MaxDIA I
Jürgen Cox |
NGS
Bèla Frohn |
Output tables
Bèla Frohn |
Isobaric labelling tutorial
Daniela Ferretti |
|
|
| 13:45 |
Welcome
Jürgen Cox |
MaxDIA II
Jürgen Cox |
MaxQuant Atlas
Daniela Ferretti |
De novo sequencing
Dmitry Alexeev |
Perseus computational PTM tutorial
Şule Yilmaz-Rumpf |
|
| 14:30 | Coffee break | Coffee break | Coffee break | Coffee break | Coffee break |
|
| 15:00 |
Typical proteomics experiments
Pelagia Kyriakidou |
MaxQuant tutorial (DDA/DIA)
Hamid Hamzeiy |
Maria Robles |
Perseus introduction
Jürgen Cox |
Perseus interactions & networks tutorial
Carlo De Nart |
|
| 15:45 |
MaxQuant basics I
Pelagia Kyriakidou |
Isobaric labelling theory
Hamid Hamzeiy |
Perseus basic tutorial
Carlo De Nart |
Cross linking
Şule Yilmaz-Rumpf |
|
|
| 16:30 | Lunch Break | Lunch break | Lunch break | Lunch break | Lunch break |
|
| 17:30 | Poster session | Poster session | Poster session | Poster session | Poster session |
|
| 18:00 |
MaxQuant basics II
Pelagia Kyriakidou |
Spectrum prediction
Shamil Urazbakhtin |
Poster session |
Perseus intermediate tutorial
Juan Luis Restrepo-López |
Eduard Sabido |
|
| 18:45 | Tamar Geiger | Albert Heck | Poster session | Paola Picotti |
Concluding remarks
Jürgen Cox |
|
| 19:30 | Coffee break | Coffee break | Coffee break |
|
||
| 20:00 |
MaxQuant basics III
Dmitry Alexeev |
MaxQuant.Live
Christoph Wichmann |
Perseus plug-in programming tutorial
Daniela Ferretti |
|
||
| 20:45 |
LFQ Quantification
Christoph Wichmann |
Question session | Social activities |
PTMs
Şule Yilmaz-Rumpf |
|
|
| 21:30 | Mini break | Mini break | Mini break |
|
||
| 21:45 | Question session |
VR based molecular modelling
Nanome inc. |
Question session |
|
||
| 22:30 |
Wikipedia proteomics editathon
Antonio Hermoso |
Wikipedia proteomics editathon
Antonio Hermoso |
|
Schedule for time zone UTC+7
| Time/Day | Monday, September 05 | Tuesday, September 06 | Wednesday, September 07 | Thursday, September 08 | Friday, September 09 | Saturday, September 10 |
|---|---|---|---|---|---|---|
| 01:00 |
|
Joint dinner | ||||
| 14:00 |
MaxDIA I
Jürgen Cox |
NGS
Bèla Frohn |
Output tables
Bèla Frohn |
Isobaric labelling tutorial
Daniela Ferretti |
|
|
| 14:45 |
Welcome
Jürgen Cox |
MaxDIA II
Jürgen Cox |
MaxQuant Atlas
Daniela Ferretti |
De novo sequencing
Dmitry Alexeev |
Perseus computational PTM tutorial
Şule Yilmaz-Rumpf |
|
| 15:30 | Coffee break | Coffee break | Coffee break | Coffee break | Coffee break |
|
| 16:00 |
Typical proteomics experiments
Pelagia Kyriakidou |
MaxQuant tutorial (DDA/DIA)
Hamid Hamzeiy |
Maria Robles |
Perseus introduction
Jürgen Cox |
Perseus interactions & networks tutorial
Carlo De Nart |
|
| 16:45 |
MaxQuant basics I
Pelagia Kyriakidou |
Isobaric labelling theory
Hamid Hamzeiy |
Perseus basic tutorial
Carlo De Nart |
Cross linking
Şule Yilmaz-Rumpf |
|
|
| 17:30 | Lunch Break | Lunch break | Lunch break | Lunch break | Lunch break |
|
| 18:30 | Poster session | Poster session | Poster session | Poster session | Poster session |
|
| 19:00 |
MaxQuant basics II
Pelagia Kyriakidou |
Spectrum prediction
Shamil Urazbakhtin |
Poster session |
Perseus intermediate tutorial
Juan Luis Restrepo-López |
Eduard Sabido |
|
| 19:45 | Tamar Geiger | Albert Heck | Poster session | Paola Picotti |
Concluding remarks
Jürgen Cox |
|
| 20:30 | Coffee break | Coffee break | Coffee break |
|
||
| 21:00 |
MaxQuant basics III
Dmitry Alexeev |
MaxQuant.Live
Christoph Wichmann |
Perseus plug-in programming tutorial
Daniela Ferretti |
|
||
| 21:45 |
LFQ Quantification
Christoph Wichmann |
Question session | Social activities |
PTMs
Şule Yilmaz-Rumpf |
|
|
| 22:30 | Mini break | Mini break | Mini break |
|
||
| 22:45 | Question session |
VR based molecular modelling
Nanome inc. |
Question session |
|
||
| 23:30 |
Wikipedia proteomics editathon
Antonio Hermoso |
Wikipedia proteomics editathon
Antonio Hermoso |
|
Schedule for time zone UTC+8
| Time/Day | Monday, September 05 | Tuesday, September 06 | Wednesday, September 07 | Thursday, September 08 | Friday, September 09 | Saturday, September 10 |
|---|---|---|---|---|---|---|
| 00:30 |
|
Wikipedia proteomics editathon
Antonio Hermoso |
Wikipedia proteomics editathon
Antonio Hermoso |
|||
| 02:00 |
|
Joint dinner | ||||
| 15:00 |
MaxDIA I
Jürgen Cox |
NGS
Bèla Frohn |
Output tables
Bèla Frohn |
Isobaric labelling tutorial
Daniela Ferretti |
|
|
| 15:45 |
Welcome
Jürgen Cox |
MaxDIA II
Jürgen Cox |
MaxQuant Atlas
Daniela Ferretti |
De novo sequencing
Dmitry Alexeev |
Perseus computational PTM tutorial
Şule Yilmaz-Rumpf |
|
| 16:30 | Coffee break | Coffee break | Coffee break | Coffee break | Coffee break |
|
| 17:00 |
Typical proteomics experiments
Pelagia Kyriakidou |
MaxQuant tutorial (DDA/DIA)
Hamid Hamzeiy |
Maria Robles |
Perseus introduction
Jürgen Cox |
Perseus interactions & networks tutorial
Carlo De Nart |
|
| 17:45 |
MaxQuant basics I
Pelagia Kyriakidou |
Isobaric labelling theory
Hamid Hamzeiy |
Perseus basic tutorial
Carlo De Nart |
Cross linking
Şule Yilmaz-Rumpf |
|
|
| 18:30 | Lunch Break | Lunch break | Lunch break | Lunch break | Lunch break |
|
| 19:30 | Poster session | Poster session | Poster session | Poster session | Poster session |
|
| 20:00 |
MaxQuant basics II
Pelagia Kyriakidou |
Spectrum prediction
Shamil Urazbakhtin |
Poster session |
Perseus intermediate tutorial
Juan Luis Restrepo-López |
Eduard Sabido |
|
| 20:45 | Tamar Geiger | Albert Heck | Poster session | Paola Picotti |
Concluding remarks
Jürgen Cox |
|
| 21:30 | Coffee break | Coffee break | Coffee break |
|
||
| 22:00 |
MaxQuant basics III
Dmitry Alexeev |
MaxQuant.Live
Christoph Wichmann |
Perseus plug-in programming tutorial
Daniela Ferretti |
|
||
| 22:45 |
LFQ Quantification
Christoph Wichmann |
Question session | Social activities |
PTMs
Şule Yilmaz-Rumpf |
|
|
| 23:30 | Mini break | Mini break | Mini break |
|
||
| 23:45 | Question session |
VR based molecular modelling
Nanome inc. |
Question session |
|
Schedule for time zone UTC+9
| Time/Day | Monday, September 05 | Tuesday, September 06 | Wednesday, September 07 | Thursday, September 08 | Friday, September 09 | Saturday, September 10 |
|---|---|---|---|---|---|---|
| 00:30 |
|
Mini break | Mini break | Mini break | ||
| 00:45 |
|
Question session |
VR based molecular modelling
Nanome inc. |
Question session | ||
| 01:30 |
|
Wikipedia proteomics editathon
Antonio Hermoso |
Wikipedia proteomics editathon
Antonio Hermoso |
|||
| 03:00 |
|
Joint dinner | ||||
| 16:00 |
MaxDIA I
Jürgen Cox |
NGS
Bèla Frohn |
Output tables
Bèla Frohn |
Isobaric labelling tutorial
Daniela Ferretti |
|
|
| 16:45 |
Welcome
Jürgen Cox |
MaxDIA II
Jürgen Cox |
MaxQuant Atlas
Daniela Ferretti |
De novo sequencing
Dmitry Alexeev |
Perseus computational PTM tutorial
Şule Yilmaz-Rumpf |
|
| 17:30 | Coffee break | Coffee break | Coffee break | Coffee break | Coffee break |
|
| 18:00 |
Typical proteomics experiments
Pelagia Kyriakidou |
MaxQuant tutorial (DDA/DIA)
Hamid Hamzeiy |
Maria Robles |
Perseus introduction
Jürgen Cox |
Perseus interactions & networks tutorial
Carlo De Nart |
|
| 18:45 |
MaxQuant basics I
Pelagia Kyriakidou |
Isobaric labelling theory
Hamid Hamzeiy |
Perseus basic tutorial
Carlo De Nart |
Cross linking
Şule Yilmaz-Rumpf |
|
|
| 19:30 | Lunch Break | Lunch break | Lunch break | Lunch break | Lunch break |
|
| 20:30 | Poster session | Poster session | Poster session | Poster session | Poster session |
|
| 21:00 |
MaxQuant basics II
Pelagia Kyriakidou |
Spectrum prediction
Shamil Urazbakhtin |
Poster session |
Perseus intermediate tutorial
Juan Luis Restrepo-López |
Eduard Sabido |
|
| 21:45 | Tamar Geiger | Albert Heck | Poster session | Paola Picotti |
Concluding remarks
Jürgen Cox |
|
| 22:30 | Coffee break | Coffee break | Coffee break |
|
||
| 23:00 |
MaxQuant basics III
Dmitry Alexeev |
MaxQuant.Live
Christoph Wichmann |
Perseus plug-in programming tutorial
Daniela Ferretti |
|
||
| 23:45 |
LFQ Quantification
Christoph Wichmann |
Question session | Social activities |
PTMs
Şule Yilmaz-Rumpf |
|
Schedule for time zone UTC+10
| Time/Day | Monday, September 05 | Tuesday, September 06 | Wednesday, September 07 | Thursday, September 08 | Friday, September 09 | Saturday, September 10 |
|---|---|---|---|---|---|---|
| 00:00 |
|
MaxQuant basics III
Dmitry Alexeev |
MaxQuant.Live
Christoph Wichmann |
Perseus plug-in programming tutorial
Daniela Ferretti |
||
| 00:45 |
|
LFQ Quantification
Christoph Wichmann |
Question session | Social activities |
PTMs
Şule Yilmaz-Rumpf |
|
| 01:30 |
|
Mini break | Mini break | Mini break | ||
| 01:45 |
|
Question session |
VR based molecular modelling
Nanome inc. |
Question session | ||
| 02:30 |
|
Wikipedia proteomics editathon
Antonio Hermoso |
Wikipedia proteomics editathon
Antonio Hermoso |
|||
| 04:00 |
|
Joint dinner | ||||
| 17:00 |
MaxDIA I
Jürgen Cox |
NGS
Bèla Frohn |
Output tables
Bèla Frohn |
Isobaric labelling tutorial
Daniela Ferretti |
|
|
| 17:45 |
Welcome
Jürgen Cox |
MaxDIA II
Jürgen Cox |
MaxQuant Atlas
Daniela Ferretti |
De novo sequencing
Dmitry Alexeev |
Perseus computational PTM tutorial
Şule Yilmaz-Rumpf |
|
| 18:30 | Coffee break | Coffee break | Coffee break | Coffee break | Coffee break |
|
| 19:00 |
Typical proteomics experiments
Pelagia Kyriakidou |
MaxQuant tutorial (DDA/DIA)
Hamid Hamzeiy |
Maria Robles |
Perseus introduction
Jürgen Cox |
Perseus interactions & networks tutorial
Carlo De Nart |
|
| 19:45 |
MaxQuant basics I
Pelagia Kyriakidou |
Isobaric labelling theory
Hamid Hamzeiy |
Perseus basic tutorial
Carlo De Nart |
Cross linking
Şule Yilmaz-Rumpf |
|
|
| 20:30 | Lunch Break | Lunch break | Lunch break | Lunch break | Lunch break |
|
| 21:30 | Poster session | Poster session | Poster session | Poster session | Poster session |
|
| 22:00 |
MaxQuant basics II
Pelagia Kyriakidou |
Spectrum prediction
Shamil Urazbakhtin |
Poster session |
Perseus intermediate tutorial
Juan Luis Restrepo-López |
Eduard Sabido |
|
| 22:45 | Tamar Geiger | Albert Heck | Poster session | Paola Picotti |
Concluding remarks
Jürgen Cox |
|
| 23:30 | Coffee break | Coffee break | Coffee break |
|
Schedule for time zone UTC+11
| Time/Day | Monday, September 05 | Tuesday, September 06 | Wednesday, September 07 | Thursday, September 08 | Friday, September 09 | Saturday, September 10 |
|---|---|---|---|---|---|---|
| 00:30 |
|
Coffee break | Coffee break | Coffee break | ||
| 01:00 |
|
MaxQuant basics III
Dmitry Alexeev |
MaxQuant.Live
Christoph Wichmann |
Perseus plug-in programming tutorial
Daniela Ferretti |
||
| 01:45 |
|
LFQ Quantification
Christoph Wichmann |
Question session | Social activities |
PTMs
Şule Yilmaz-Rumpf |
|
| 02:30 |
|
Mini break | Mini break | Mini break | ||
| 02:45 |
|
Question session |
VR based molecular modelling
Nanome inc. |
Question session | ||
| 03:30 |
|
Wikipedia proteomics editathon
Antonio Hermoso |
Wikipedia proteomics editathon
Antonio Hermoso |
|||
| 05:00 |
|
Joint dinner | ||||
| 18:00 |
MaxDIA I
Jürgen Cox |
NGS
Bèla Frohn |
Output tables
Bèla Frohn |
Isobaric labelling tutorial
Daniela Ferretti |
|
|
| 18:45 |
Welcome
Jürgen Cox |
MaxDIA II
Jürgen Cox |
MaxQuant Atlas
Daniela Ferretti |
De novo sequencing
Dmitry Alexeev |
Perseus computational PTM tutorial
Şule Yilmaz-Rumpf |
|
| 19:30 | Coffee break | Coffee break | Coffee break | Coffee break | Coffee break |
|
| 20:00 |
Typical proteomics experiments
Pelagia Kyriakidou |
MaxQuant tutorial (DDA/DIA)
Hamid Hamzeiy |
Maria Robles |
Perseus introduction
Jürgen Cox |
Perseus interactions & networks tutorial
Carlo De Nart |
|
| 20:45 |
MaxQuant basics I
Pelagia Kyriakidou |
Isobaric labelling theory
Hamid Hamzeiy |
Perseus basic tutorial
Carlo De Nart |
Cross linking
Şule Yilmaz-Rumpf |
|
|
| 21:30 | Lunch Break | Lunch break | Lunch break | Lunch break | Lunch break |
|
| 22:30 | Poster session | Poster session | Poster session | Poster session | Poster session |
|
| 23:00 |
MaxQuant basics II
Pelagia Kyriakidou |
Spectrum prediction
Shamil Urazbakhtin |
Poster session |
Perseus intermediate tutorial
Juan Luis Restrepo-López |
Eduard Sabido |
|
| 23:45 | Tamar Geiger | Albert Heck | Poster session | Paola Picotti |
Concluding remarks
Jürgen Cox |
|
Organizers
Jürgen Cox
MPI of Biochemistry
Pelagia Kyriakidou
MPI of Biochemistry
Carlo De Nart
MPI of Biochemistry
Eduard Sabido
CRG
Damjana Kastelic
CRG
Jonas Krebs
CRG
Partner Organizations
Open position for Postdocs
Our group ( CoxLab ) is currently looking for Postdocs. If you have expertise in Computational Biology with a programming background and you want to join our group contact Jürgen Cox: cox@biochem.mpg.de
Contacts regarding the Summerschool
For questions send an e-mail to the following address:
summerschool@maxquant.de
Physical address:
Max-Planck-Institute of Biochemistry - Computational Systems Biochemistry
Am Klopferspitz 18, D-82152 Martinsried, Germany