The Summer School provides hands-on training in computational analysis of proteomics data generated by modern mass spectrometers. The practical parts will enable participants to perform sophisticated quantitative data analysis in their own future research using the publicly available MaxQuant and Perseus software.
Summer School 2021 will be online
Date: June 21 - 25, 2021
Location: Internet
Conference Fee: It's for free
Registration is open now!
Location: Internet
Conference Fee: It's for free
Registration is open now!
All talks will be uploaded to YouTube
Plenary speakers
Ruedi Aebersold
ETH Zürich
Joshua J. Coon
University of Wisconsin-Madison
Steven P. Gygi
Harvard Medical School
Nikolai Slavov
Northeastern University
Schedule for time zone UTC-12
| Time/Day | Sunday, June 20 | Monday, June 21 | Tuesday, June 22 | Wednesday, June 23 | Thursday, June 24 | Friday, June 25 |
|---|---|---|---|---|---|---|
| 00:30 |
|
Break | Break | Break | Break | Break |
| 01:00 |
|
Quantification
Christoph Wichmann |
MaxDIA Tutorial
Hamid Hamzeiy |
Ion Mobility
Jürgen Cox |
Perseus intermediate
Daniela Ferretti |
Dynamic organellar maps go ultra-sensitive and high-throughput with MaxDIA
Vincent Albrecht & Julia Schessner |
| 01:45 |
|
Advanced identification strategies
Pelagia Kyriakidou |
Output tables
Béla Frohn |
De novo sequencing
Jürgen Cox |
Perseus Computational PTM proteomics
Şule Yılmaz-Rumpf |
Q&A
Jürgen Cox |
| 02:30 |
|
Break | Break | Break | Break | Break |
| 03:00 |
|
Q&A
Jürgen Cox |
Reimagining Fragment-Based, Reactive-Cysteine Profiling
Steven P. Gygi |
Plenary talk
Joshua J. Coon |
Translating proteomic data into biological knowledge: Implications for experimental design
Ruedi Aebersold |
Computational opportunities for single-cell proteomics
Nikolai Slavov |
| 03:45 |
|
MaxQuant.Live
Christoph Wichmann |
Isobaric labeling
Sung-Huan Yu |
Grandpep
Petra Gutenbrunner |
Perseus Interactions & networks
Shivani Tiwary |
Current developments
Béla Frohn |
| 04:30 |
|
Questions - open mic | Questions - open mic | Questions - open mic | Questions - open mic | Questions - open mic |
| 22:45 |
Welcome
Jürgen Cox |
|
||||
| 23:00 |
Typical proteomics experiments
Jürgen Cox |
MaxDIA
Jürgen Cox |
PTMs
Şule Yılmaz-Rumpf |
Perseus introduction
Jürgen Cox |
Cross Linking
Şule Yılmaz-Rumpf |
|
| 23:45 |
Identification
Pelagia Kyriakidou |
MaxDIA II
Pavel Sinitcyn |
NGS
Pavel Sinitcyn |
Perseus basics
Franziska Traube |
Perseus Plug-in programming
Pavel Sinitcyn |
|
Schedule for time zone UTC-11
| Time/Day | Sunday, June 20 | Monday, June 21 | Tuesday, June 22 | Wednesday, June 23 | Thursday, June 24 | Friday, June 25 |
|---|---|---|---|---|---|---|
| 00:00 |
|
Typical proteomics experiments
Jürgen Cox |
MaxDIA
Jürgen Cox |
PTMs
Şule Yılmaz-Rumpf |
Perseus introduction
Jürgen Cox |
Cross Linking
Şule Yılmaz-Rumpf |
| 00:45 |
|
Identification
Pelagia Kyriakidou |
MaxDIA II
Pavel Sinitcyn |
NGS
Pavel Sinitcyn |
Perseus basics
Franziska Traube |
Perseus Plug-in programming
Pavel Sinitcyn |
| 01:30 |
|
Break | Break | Break | Break | Break |
| 02:00 |
|
Quantification
Christoph Wichmann |
MaxDIA Tutorial
Hamid Hamzeiy |
Ion Mobility
Jürgen Cox |
Perseus intermediate
Daniela Ferretti |
Dynamic organellar maps go ultra-sensitive and high-throughput with MaxDIA
Vincent Albrecht & Julia Schessner |
| 02:45 |
|
Advanced identification strategies
Pelagia Kyriakidou |
Output tables
Béla Frohn |
De novo sequencing
Jürgen Cox |
Perseus Computational PTM proteomics
Şule Yılmaz-Rumpf |
Q&A
Jürgen Cox |
| 03:30 |
|
Break | Break | Break | Break | Break |
| 04:00 |
|
Q&A
Jürgen Cox |
Reimagining Fragment-Based, Reactive-Cysteine Profiling
Steven P. Gygi |
Plenary talk
Joshua J. Coon |
Translating proteomic data into biological knowledge: Implications for experimental design
Ruedi Aebersold |
Computational opportunities for single-cell proteomics
Nikolai Slavov |
| 04:45 |
|
MaxQuant.Live
Christoph Wichmann |
Isobaric labeling
Sung-Huan Yu |
Grandpep
Petra Gutenbrunner |
Perseus Interactions & networks
Shivani Tiwary |
Current developments
Béla Frohn |
| 05:30 |
|
Questions - open mic | Questions - open mic | Questions - open mic | Questions - open mic | Questions - open mic |
| 23:45 |
Welcome
Jürgen Cox |
|
Schedule for time zone UTC-10
| Time/Day | Monday, June 21 | Tuesday, June 22 | Wednesday, June 23 | Thursday, June 24 | Friday, June 25 |
|---|---|---|---|---|---|
| 00:45 |
Welcome
Jürgen Cox |
||||
| 01:00 |
Typical proteomics experiments
Jürgen Cox |
MaxDIA
Jürgen Cox |
PTMs
Şule Yılmaz-Rumpf |
Perseus introduction
Jürgen Cox |
Cross Linking
Şule Yılmaz-Rumpf |
| 01:45 |
Identification
Pelagia Kyriakidou |
MaxDIA II
Pavel Sinitcyn |
NGS
Pavel Sinitcyn |
Perseus basics
Franziska Traube |
Perseus Plug-in programming
Pavel Sinitcyn |
| 02:30 | Break | Break | Break | Break | Break |
| 03:00 |
Quantification
Christoph Wichmann |
MaxDIA Tutorial
Hamid Hamzeiy |
Ion Mobility
Jürgen Cox |
Perseus intermediate
Daniela Ferretti |
Dynamic organellar maps go ultra-sensitive and high-throughput with MaxDIA
Vincent Albrecht & Julia Schessner |
| 03:45 |
Advanced identification strategies
Pelagia Kyriakidou |
Output tables
Béla Frohn |
De novo sequencing
Jürgen Cox |
Perseus Computational PTM proteomics
Şule Yılmaz-Rumpf |
Q&A
Jürgen Cox |
| 04:30 | Break | Break | Break | Break | Break |
| 05:00 |
Q&A
Jürgen Cox |
Reimagining Fragment-Based, Reactive-Cysteine Profiling
Steven P. Gygi |
Plenary talk
Joshua J. Coon |
Translating proteomic data into biological knowledge: Implications for experimental design
Ruedi Aebersold |
Computational opportunities for single-cell proteomics
Nikolai Slavov |
| 05:45 |
MaxQuant.Live
Christoph Wichmann |
Isobaric labeling
Sung-Huan Yu |
Grandpep
Petra Gutenbrunner |
Perseus Interactions & networks
Shivani Tiwary |
Current developments
Béla Frohn |
| 06:30 | Questions - open mic | Questions - open mic | Questions - open mic | Questions - open mic | Questions - open mic |
Schedule for time zone UTC-9
| Time/Day | Monday, June 21 | Tuesday, June 22 | Wednesday, June 23 | Thursday, June 24 | Friday, June 25 |
|---|---|---|---|---|---|
| 01:45 |
Welcome
Jürgen Cox |
||||
| 02:00 |
Typical proteomics experiments
Jürgen Cox |
MaxDIA
Jürgen Cox |
PTMs
Şule Yılmaz-Rumpf |
Perseus introduction
Jürgen Cox |
Cross Linking
Şule Yılmaz-Rumpf |
| 02:45 |
Identification
Pelagia Kyriakidou |
MaxDIA II
Pavel Sinitcyn |
NGS
Pavel Sinitcyn |
Perseus basics
Franziska Traube |
Perseus Plug-in programming
Pavel Sinitcyn |
| 03:30 | Break | Break | Break | Break | Break |
| 04:00 |
Quantification
Christoph Wichmann |
MaxDIA Tutorial
Hamid Hamzeiy |
Ion Mobility
Jürgen Cox |
Perseus intermediate
Daniela Ferretti |
Dynamic organellar maps go ultra-sensitive and high-throughput with MaxDIA
Vincent Albrecht & Julia Schessner |
| 04:45 |
Advanced identification strategies
Pelagia Kyriakidou |
Output tables
Béla Frohn |
De novo sequencing
Jürgen Cox |
Perseus Computational PTM proteomics
Şule Yılmaz-Rumpf |
Q&A
Jürgen Cox |
| 05:30 | Break | Break | Break | Break | Break |
| 06:00 |
Q&A
Jürgen Cox |
Reimagining Fragment-Based, Reactive-Cysteine Profiling
Steven P. Gygi |
Plenary talk
Joshua J. Coon |
Translating proteomic data into biological knowledge: Implications for experimental design
Ruedi Aebersold |
Computational opportunities for single-cell proteomics
Nikolai Slavov |
| 06:45 |
MaxQuant.Live
Christoph Wichmann |
Isobaric labeling
Sung-Huan Yu |
Grandpep
Petra Gutenbrunner |
Perseus Interactions & networks
Shivani Tiwary |
Current developments
Béla Frohn |
| 07:30 | Questions - open mic | Questions - open mic | Questions - open mic | Questions - open mic | Questions - open mic |
Schedule for time zone UTC-8
| Time/Day | Monday, June 21 | Tuesday, June 22 | Wednesday, June 23 | Thursday, June 24 | Friday, June 25 |
|---|---|---|---|---|---|
| 02:45 |
Welcome
Jürgen Cox |
||||
| 03:00 |
Typical proteomics experiments
Jürgen Cox |
MaxDIA
Jürgen Cox |
PTMs
Şule Yılmaz-Rumpf |
Perseus introduction
Jürgen Cox |
Cross Linking
Şule Yılmaz-Rumpf |
| 03:45 |
Identification
Pelagia Kyriakidou |
MaxDIA II
Pavel Sinitcyn |
NGS
Pavel Sinitcyn |
Perseus basics
Franziska Traube |
Perseus Plug-in programming
Pavel Sinitcyn |
| 04:30 | Break | Break | Break | Break | Break |
| 05:00 |
Quantification
Christoph Wichmann |
MaxDIA Tutorial
Hamid Hamzeiy |
Ion Mobility
Jürgen Cox |
Perseus intermediate
Daniela Ferretti |
Dynamic organellar maps go ultra-sensitive and high-throughput with MaxDIA
Vincent Albrecht & Julia Schessner |
| 05:45 |
Advanced identification strategies
Pelagia Kyriakidou |
Output tables
Béla Frohn |
De novo sequencing
Jürgen Cox |
Perseus Computational PTM proteomics
Şule Yılmaz-Rumpf |
Q&A
Jürgen Cox |
| 06:30 | Break | Break | Break | Break | Break |
| 07:00 |
Q&A
Jürgen Cox |
Reimagining Fragment-Based, Reactive-Cysteine Profiling
Steven P. Gygi |
Plenary talk
Joshua J. Coon |
Translating proteomic data into biological knowledge: Implications for experimental design
Ruedi Aebersold |
Computational opportunities for single-cell proteomics
Nikolai Slavov |
| 07:45 |
MaxQuant.Live
Christoph Wichmann |
Isobaric labeling
Sung-Huan Yu |
Grandpep
Petra Gutenbrunner |
Perseus Interactions & networks
Shivani Tiwary |
Current developments
Béla Frohn |
| 08:30 | Questions - open mic | Questions - open mic | Questions - open mic | Questions - open mic | Questions - open mic |
Schedule for time zone UTC-7
| Time/Day | Monday, June 21 | Tuesday, June 22 | Wednesday, June 23 | Thursday, June 24 | Friday, June 25 |
|---|---|---|---|---|---|
| 03:45 |
Welcome
Jürgen Cox |
||||
| 04:00 |
Typical proteomics experiments
Jürgen Cox |
MaxDIA
Jürgen Cox |
PTMs
Şule Yılmaz-Rumpf |
Perseus introduction
Jürgen Cox |
Cross Linking
Şule Yılmaz-Rumpf |
| 04:45 |
Identification
Pelagia Kyriakidou |
MaxDIA II
Pavel Sinitcyn |
NGS
Pavel Sinitcyn |
Perseus basics
Franziska Traube |
Perseus Plug-in programming
Pavel Sinitcyn |
| 05:30 | Break | Break | Break | Break | Break |
| 06:00 |
Quantification
Christoph Wichmann |
MaxDIA Tutorial
Hamid Hamzeiy |
Ion Mobility
Jürgen Cox |
Perseus intermediate
Daniela Ferretti |
Dynamic organellar maps go ultra-sensitive and high-throughput with MaxDIA
Vincent Albrecht & Julia Schessner |
| 06:45 |
Advanced identification strategies
Pelagia Kyriakidou |
Output tables
Béla Frohn |
De novo sequencing
Jürgen Cox |
Perseus Computational PTM proteomics
Şule Yılmaz-Rumpf |
Q&A
Jürgen Cox |
| 07:30 | Break | Break | Break | Break | Break |
| 08:00 |
Q&A
Jürgen Cox |
Reimagining Fragment-Based, Reactive-Cysteine Profiling
Steven P. Gygi |
Plenary talk
Joshua J. Coon |
Translating proteomic data into biological knowledge: Implications for experimental design
Ruedi Aebersold |
Computational opportunities for single-cell proteomics
Nikolai Slavov |
| 08:45 |
MaxQuant.Live
Christoph Wichmann |
Isobaric labeling
Sung-Huan Yu |
Grandpep
Petra Gutenbrunner |
Perseus Interactions & networks
Shivani Tiwary |
Current developments
Béla Frohn |
| 09:30 | Questions - open mic | Questions - open mic | Questions - open mic | Questions - open mic | Questions - open mic |
Schedule for time zone UTC-6
| Time/Day | Monday, June 21 | Tuesday, June 22 | Wednesday, June 23 | Thursday, June 24 | Friday, June 25 |
|---|---|---|---|---|---|
| 04:45 |
Welcome
Jürgen Cox |
||||
| 05:00 |
Typical proteomics experiments
Jürgen Cox |
MaxDIA
Jürgen Cox |
PTMs
Şule Yılmaz-Rumpf |
Perseus introduction
Jürgen Cox |
Cross Linking
Şule Yılmaz-Rumpf |
| 05:45 |
Identification
Pelagia Kyriakidou |
MaxDIA II
Pavel Sinitcyn |
NGS
Pavel Sinitcyn |
Perseus basics
Franziska Traube |
Perseus Plug-in programming
Pavel Sinitcyn |
| 06:30 | Break | Break | Break | Break | Break |
| 07:00 |
Quantification
Christoph Wichmann |
MaxDIA Tutorial
Hamid Hamzeiy |
Ion Mobility
Jürgen Cox |
Perseus intermediate
Daniela Ferretti |
Dynamic organellar maps go ultra-sensitive and high-throughput with MaxDIA
Vincent Albrecht & Julia Schessner |
| 07:45 |
Advanced identification strategies
Pelagia Kyriakidou |
Output tables
Béla Frohn |
De novo sequencing
Jürgen Cox |
Perseus Computational PTM proteomics
Şule Yılmaz-Rumpf |
Q&A
Jürgen Cox |
| 08:30 | Break | Break | Break | Break | Break |
| 09:00 |
Q&A
Jürgen Cox |
Reimagining Fragment-Based, Reactive-Cysteine Profiling
Steven P. Gygi |
Plenary talk
Joshua J. Coon |
Translating proteomic data into biological knowledge: Implications for experimental design
Ruedi Aebersold |
Computational opportunities for single-cell proteomics
Nikolai Slavov |
| 09:45 |
MaxQuant.Live
Christoph Wichmann |
Isobaric labeling
Sung-Huan Yu |
Grandpep
Petra Gutenbrunner |
Perseus Interactions & networks
Shivani Tiwary |
Current developments
Béla Frohn |
| 10:30 | Questions - open mic | Questions - open mic | Questions - open mic | Questions - open mic | Questions - open mic |
Schedule for time zone UTC-5
| Time/Day | Monday, June 21 | Tuesday, June 22 | Wednesday, June 23 | Thursday, June 24 | Friday, June 25 |
|---|---|---|---|---|---|
| 05:45 |
Welcome
Jürgen Cox |
||||
| 06:00 |
Typical proteomics experiments
Jürgen Cox |
MaxDIA
Jürgen Cox |
PTMs
Şule Yılmaz-Rumpf |
Perseus introduction
Jürgen Cox |
Cross Linking
Şule Yılmaz-Rumpf |
| 06:45 |
Identification
Pelagia Kyriakidou |
MaxDIA II
Pavel Sinitcyn |
NGS
Pavel Sinitcyn |
Perseus basics
Franziska Traube |
Perseus Plug-in programming
Pavel Sinitcyn |
| 07:30 | Break | Break | Break | Break | Break |
| 08:00 |
Quantification
Christoph Wichmann |
MaxDIA Tutorial
Hamid Hamzeiy |
Ion Mobility
Jürgen Cox |
Perseus intermediate
Daniela Ferretti |
Dynamic organellar maps go ultra-sensitive and high-throughput with MaxDIA
Vincent Albrecht & Julia Schessner |
| 08:45 |
Advanced identification strategies
Pelagia Kyriakidou |
Output tables
Béla Frohn |
De novo sequencing
Jürgen Cox |
Perseus Computational PTM proteomics
Şule Yılmaz-Rumpf |
Q&A
Jürgen Cox |
| 09:30 | Break | Break | Break | Break | Break |
| 10:00 |
Q&A
Jürgen Cox |
Reimagining Fragment-Based, Reactive-Cysteine Profiling
Steven P. Gygi |
Plenary talk
Joshua J. Coon |
Translating proteomic data into biological knowledge: Implications for experimental design
Ruedi Aebersold |
Computational opportunities for single-cell proteomics
Nikolai Slavov |
| 10:45 |
MaxQuant.Live
Christoph Wichmann |
Isobaric labeling
Sung-Huan Yu |
Grandpep
Petra Gutenbrunner |
Perseus Interactions & networks
Shivani Tiwary |
Current developments
Béla Frohn |
| 11:30 | Questions - open mic | Questions - open mic | Questions - open mic | Questions - open mic | Questions - open mic |
Schedule for time zone UTC-4
| Time/Day | Monday, June 21 | Tuesday, June 22 | Wednesday, June 23 | Thursday, June 24 | Friday, June 25 |
|---|---|---|---|---|---|
| 06:45 |
Welcome
Jürgen Cox |
||||
| 07:00 |
Typical proteomics experiments
Jürgen Cox |
MaxDIA
Jürgen Cox |
PTMs
Şule Yılmaz-Rumpf |
Perseus introduction
Jürgen Cox |
Cross Linking
Şule Yılmaz-Rumpf |
| 07:45 |
Identification
Pelagia Kyriakidou |
MaxDIA II
Pavel Sinitcyn |
NGS
Pavel Sinitcyn |
Perseus basics
Franziska Traube |
Perseus Plug-in programming
Pavel Sinitcyn |
| 08:30 | Break | Break | Break | Break | Break |
| 09:00 |
Quantification
Christoph Wichmann |
MaxDIA Tutorial
Hamid Hamzeiy |
Ion Mobility
Jürgen Cox |
Perseus intermediate
Daniela Ferretti |
Dynamic organellar maps go ultra-sensitive and high-throughput with MaxDIA
Vincent Albrecht & Julia Schessner |
| 09:45 |
Advanced identification strategies
Pelagia Kyriakidou |
Output tables
Béla Frohn |
De novo sequencing
Jürgen Cox |
Perseus Computational PTM proteomics
Şule Yılmaz-Rumpf |
Q&A
Jürgen Cox |
| 10:30 | Break | Break | Break | Break | Break |
| 11:00 |
Q&A
Jürgen Cox |
Reimagining Fragment-Based, Reactive-Cysteine Profiling
Steven P. Gygi |
Plenary talk
Joshua J. Coon |
Translating proteomic data into biological knowledge: Implications for experimental design
Ruedi Aebersold |
Computational opportunities for single-cell proteomics
Nikolai Slavov |
| 11:45 |
MaxQuant.Live
Christoph Wichmann |
Isobaric labeling
Sung-Huan Yu |
Grandpep
Petra Gutenbrunner |
Perseus Interactions & networks
Shivani Tiwary |
Current developments
Béla Frohn |
| 12:30 | Questions - open mic | Questions - open mic | Questions - open mic | Questions - open mic | Questions - open mic |
Schedule for time zone UTC-3
| Time/Day | Monday, June 21 | Tuesday, June 22 | Wednesday, June 23 | Thursday, June 24 | Friday, June 25 |
|---|---|---|---|---|---|
| 07:45 |
Welcome
Jürgen Cox |
||||
| 08:00 |
Typical proteomics experiments
Jürgen Cox |
MaxDIA
Jürgen Cox |
PTMs
Şule Yılmaz-Rumpf |
Perseus introduction
Jürgen Cox |
Cross Linking
Şule Yılmaz-Rumpf |
| 08:45 |
Identification
Pelagia Kyriakidou |
MaxDIA II
Pavel Sinitcyn |
NGS
Pavel Sinitcyn |
Perseus basics
Franziska Traube |
Perseus Plug-in programming
Pavel Sinitcyn |
| 09:30 | Break | Break | Break | Break | Break |
| 10:00 |
Quantification
Christoph Wichmann |
MaxDIA Tutorial
Hamid Hamzeiy |
Ion Mobility
Jürgen Cox |
Perseus intermediate
Daniela Ferretti |
Dynamic organellar maps go ultra-sensitive and high-throughput with MaxDIA
Vincent Albrecht & Julia Schessner |
| 10:45 |
Advanced identification strategies
Pelagia Kyriakidou |
Output tables
Béla Frohn |
De novo sequencing
Jürgen Cox |
Perseus Computational PTM proteomics
Şule Yılmaz-Rumpf |
Q&A
Jürgen Cox |
| 11:30 | Break | Break | Break | Break | Break |
| 12:00 |
Q&A
Jürgen Cox |
Reimagining Fragment-Based, Reactive-Cysteine Profiling
Steven P. Gygi |
Plenary talk
Joshua J. Coon |
Translating proteomic data into biological knowledge: Implications for experimental design
Ruedi Aebersold |
Computational opportunities for single-cell proteomics
Nikolai Slavov |
| 12:45 |
MaxQuant.Live
Christoph Wichmann |
Isobaric labeling
Sung-Huan Yu |
Grandpep
Petra Gutenbrunner |
Perseus Interactions & networks
Shivani Tiwary |
Current developments
Béla Frohn |
| 13:30 | Questions - open mic | Questions - open mic | Questions - open mic | Questions - open mic | Questions - open mic |
Schedule for time zone UTC-2
| Time/Day | Monday, June 21 | Tuesday, June 22 | Wednesday, June 23 | Thursday, June 24 | Friday, June 25 |
|---|---|---|---|---|---|
| 08:45 |
Welcome
Jürgen Cox |
||||
| 09:00 |
Typical proteomics experiments
Jürgen Cox |
MaxDIA
Jürgen Cox |
PTMs
Şule Yılmaz-Rumpf |
Perseus introduction
Jürgen Cox |
Cross Linking
Şule Yılmaz-Rumpf |
| 09:45 |
Identification
Pelagia Kyriakidou |
MaxDIA II
Pavel Sinitcyn |
NGS
Pavel Sinitcyn |
Perseus basics
Franziska Traube |
Perseus Plug-in programming
Pavel Sinitcyn |
| 10:30 | Break | Break | Break | Break | Break |
| 11:00 |
Quantification
Christoph Wichmann |
MaxDIA Tutorial
Hamid Hamzeiy |
Ion Mobility
Jürgen Cox |
Perseus intermediate
Daniela Ferretti |
Dynamic organellar maps go ultra-sensitive and high-throughput with MaxDIA
Vincent Albrecht & Julia Schessner |
| 11:45 |
Advanced identification strategies
Pelagia Kyriakidou |
Output tables
Béla Frohn |
De novo sequencing
Jürgen Cox |
Perseus Computational PTM proteomics
Şule Yılmaz-Rumpf |
Q&A
Jürgen Cox |
| 12:30 | Break | Break | Break | Break | Break |
| 13:00 |
Q&A
Jürgen Cox |
Reimagining Fragment-Based, Reactive-Cysteine Profiling
Steven P. Gygi |
Plenary talk
Joshua J. Coon |
Translating proteomic data into biological knowledge: Implications for experimental design
Ruedi Aebersold |
Computational opportunities for single-cell proteomics
Nikolai Slavov |
| 13:45 |
MaxQuant.Live
Christoph Wichmann |
Isobaric labeling
Sung-Huan Yu |
Grandpep
Petra Gutenbrunner |
Perseus Interactions & networks
Shivani Tiwary |
Current developments
Béla Frohn |
| 14:30 | Questions - open mic | Questions - open mic | Questions - open mic | Questions - open mic | Questions - open mic |
Schedule for time zone UTC-1
| Time/Day | Monday, June 21 | Tuesday, June 22 | Wednesday, June 23 | Thursday, June 24 | Friday, June 25 |
|---|---|---|---|---|---|
| 09:45 |
Welcome
Jürgen Cox |
||||
| 10:00 |
Typical proteomics experiments
Jürgen Cox |
MaxDIA
Jürgen Cox |
PTMs
Şule Yılmaz-Rumpf |
Perseus introduction
Jürgen Cox |
Cross Linking
Şule Yılmaz-Rumpf |
| 10:45 |
Identification
Pelagia Kyriakidou |
MaxDIA II
Pavel Sinitcyn |
NGS
Pavel Sinitcyn |
Perseus basics
Franziska Traube |
Perseus Plug-in programming
Pavel Sinitcyn |
| 11:30 | Break | Break | Break | Break | Break |
| 12:00 |
Quantification
Christoph Wichmann |
MaxDIA Tutorial
Hamid Hamzeiy |
Ion Mobility
Jürgen Cox |
Perseus intermediate
Daniela Ferretti |
Dynamic organellar maps go ultra-sensitive and high-throughput with MaxDIA
Vincent Albrecht & Julia Schessner |
| 12:45 |
Advanced identification strategies
Pelagia Kyriakidou |
Output tables
Béla Frohn |
De novo sequencing
Jürgen Cox |
Perseus Computational PTM proteomics
Şule Yılmaz-Rumpf |
Q&A
Jürgen Cox |
| 13:30 | Break | Break | Break | Break | Break |
| 14:00 |
Q&A
Jürgen Cox |
Reimagining Fragment-Based, Reactive-Cysteine Profiling
Steven P. Gygi |
Plenary talk
Joshua J. Coon |
Translating proteomic data into biological knowledge: Implications for experimental design
Ruedi Aebersold |
Computational opportunities for single-cell proteomics
Nikolai Slavov |
| 14:45 |
MaxQuant.Live
Christoph Wichmann |
Isobaric labeling
Sung-Huan Yu |
Grandpep
Petra Gutenbrunner |
Perseus Interactions & networks
Shivani Tiwary |
Current developments
Béla Frohn |
| 15:30 | Questions - open mic | Questions - open mic | Questions - open mic | Questions - open mic | Questions - open mic |
Schedule for time zone UTC+0
| Time/Day | Monday, June 21 | Tuesday, June 22 | Wednesday, June 23 | Thursday, June 24 | Friday, June 25 |
|---|---|---|---|---|---|
| 10:45 |
Welcome
Jürgen Cox |
||||
| 11:00 |
Typical proteomics experiments
Jürgen Cox |
MaxDIA
Jürgen Cox |
PTMs
Şule Yılmaz-Rumpf |
Perseus introduction
Jürgen Cox |
Cross Linking
Şule Yılmaz-Rumpf |
| 11:45 |
Identification
Pelagia Kyriakidou |
MaxDIA II
Pavel Sinitcyn |
NGS
Pavel Sinitcyn |
Perseus basics
Franziska Traube |
Perseus Plug-in programming
Pavel Sinitcyn |
| 12:30 | Break | Break | Break | Break | Break |
| 13:00 |
Quantification
Christoph Wichmann |
MaxDIA Tutorial
Hamid Hamzeiy |
Ion Mobility
Jürgen Cox |
Perseus intermediate
Daniela Ferretti |
Dynamic organellar maps go ultra-sensitive and high-throughput with MaxDIA
Vincent Albrecht & Julia Schessner |
| 13:45 |
Advanced identification strategies
Pelagia Kyriakidou |
Output tables
Béla Frohn |
De novo sequencing
Jürgen Cox |
Perseus Computational PTM proteomics
Şule Yılmaz-Rumpf |
Q&A
Jürgen Cox |
| 14:30 | Break | Break | Break | Break | Break |
| 15:00 |
Q&A
Jürgen Cox |
Reimagining Fragment-Based, Reactive-Cysteine Profiling
Steven P. Gygi |
Plenary talk
Joshua J. Coon |
Translating proteomic data into biological knowledge: Implications for experimental design
Ruedi Aebersold |
Computational opportunities for single-cell proteomics
Nikolai Slavov |
| 15:45 |
MaxQuant.Live
Christoph Wichmann |
Isobaric labeling
Sung-Huan Yu |
Grandpep
Petra Gutenbrunner |
Perseus Interactions & networks
Shivani Tiwary |
Current developments
Béla Frohn |
| 16:30 | Questions - open mic | Questions - open mic | Questions - open mic | Questions - open mic | Questions - open mic |
Schedule for time zone UTC+1
| Time/Day | Monday, June 21 | Tuesday, June 22 | Wednesday, June 23 | Thursday, June 24 | Friday, June 25 |
|---|---|---|---|---|---|
| 11:45 |
Welcome
Jürgen Cox |
||||
| 12:00 |
Typical proteomics experiments
Jürgen Cox |
MaxDIA
Jürgen Cox |
PTMs
Şule Yılmaz-Rumpf |
Perseus introduction
Jürgen Cox |
Cross Linking
Şule Yılmaz-Rumpf |
| 12:45 |
Identification
Pelagia Kyriakidou |
MaxDIA II
Pavel Sinitcyn |
NGS
Pavel Sinitcyn |
Perseus basics
Franziska Traube |
Perseus Plug-in programming
Pavel Sinitcyn |
| 13:30 | Break | Break | Break | Break | Break |
| 14:00 |
Quantification
Christoph Wichmann |
MaxDIA Tutorial
Hamid Hamzeiy |
Ion Mobility
Jürgen Cox |
Perseus intermediate
Daniela Ferretti |
Dynamic organellar maps go ultra-sensitive and high-throughput with MaxDIA
Vincent Albrecht & Julia Schessner |
| 14:45 |
Advanced identification strategies
Pelagia Kyriakidou |
Output tables
Béla Frohn |
De novo sequencing
Jürgen Cox |
Perseus Computational PTM proteomics
Şule Yılmaz-Rumpf |
Q&A
Jürgen Cox |
| 15:30 | Break | Break | Break | Break | Break |
| 16:00 |
Q&A
Jürgen Cox |
Reimagining Fragment-Based, Reactive-Cysteine Profiling
Steven P. Gygi |
Plenary talk
Joshua J. Coon |
Translating proteomic data into biological knowledge: Implications for experimental design
Ruedi Aebersold |
Computational opportunities for single-cell proteomics
Nikolai Slavov |
| 16:45 |
MaxQuant.Live
Christoph Wichmann |
Isobaric labeling
Sung-Huan Yu |
Grandpep
Petra Gutenbrunner |
Perseus Interactions & networks
Shivani Tiwary |
Current developments
Béla Frohn |
| 17:30 | Questions - open mic | Questions - open mic | Questions - open mic | Questions - open mic | Questions - open mic |
Schedule for time zone UTC+2
| Time/Day | Monday, June 21 | Tuesday, June 22 | Wednesday, June 23 | Thursday, June 24 | Friday, June 25 |
|---|---|---|---|---|---|
| 12:45 |
Welcome
Jürgen Cox |
||||
| 13:00 |
Typical proteomics experiments
Jürgen Cox |
MaxDIA
Jürgen Cox |
PTMs
Şule Yılmaz-Rumpf |
Perseus introduction
Jürgen Cox |
Cross Linking
Şule Yılmaz-Rumpf |
| 13:45 |
Identification
Pelagia Kyriakidou |
MaxDIA II
Pavel Sinitcyn |
NGS
Pavel Sinitcyn |
Perseus basics
Franziska Traube |
Perseus Plug-in programming
Pavel Sinitcyn |
| 14:30 | Break | Break | Break | Break | Break |
| 15:00 |
Quantification
Christoph Wichmann |
MaxDIA Tutorial
Hamid Hamzeiy |
Ion Mobility
Jürgen Cox |
Perseus intermediate
Daniela Ferretti |
Dynamic organellar maps go ultra-sensitive and high-throughput with MaxDIA
Vincent Albrecht & Julia Schessner |
| 15:45 |
Advanced identification strategies
Pelagia Kyriakidou |
Output tables
Béla Frohn |
De novo sequencing
Jürgen Cox |
Perseus Computational PTM proteomics
Şule Yılmaz-Rumpf |
Q&A
Jürgen Cox |
| 16:30 | Break | Break | Break | Break | Break |
| 17:00 |
Q&A
Jürgen Cox |
Reimagining Fragment-Based, Reactive-Cysteine Profiling
Steven P. Gygi |
Plenary talk
Joshua J. Coon |
Translating proteomic data into biological knowledge: Implications for experimental design
Ruedi Aebersold |
Computational opportunities for single-cell proteomics
Nikolai Slavov |
| 17:45 |
MaxQuant.Live
Christoph Wichmann |
Isobaric labeling
Sung-Huan Yu |
Grandpep
Petra Gutenbrunner |
Perseus Interactions & networks
Shivani Tiwary |
Current developments
Béla Frohn |
| 18:30 | Questions - open mic | Questions - open mic | Questions - open mic | Questions - open mic | Questions - open mic |
Schedule for time zone UTC+3
| Time/Day | Monday, June 21 | Tuesday, June 22 | Wednesday, June 23 | Thursday, June 24 | Friday, June 25 |
|---|---|---|---|---|---|
| 13:45 |
Welcome
Jürgen Cox |
||||
| 14:00 |
Typical proteomics experiments
Jürgen Cox |
MaxDIA
Jürgen Cox |
PTMs
Şule Yılmaz-Rumpf |
Perseus introduction
Jürgen Cox |
Cross Linking
Şule Yılmaz-Rumpf |
| 14:45 |
Identification
Pelagia Kyriakidou |
MaxDIA II
Pavel Sinitcyn |
NGS
Pavel Sinitcyn |
Perseus basics
Franziska Traube |
Perseus Plug-in programming
Pavel Sinitcyn |
| 15:30 | Break | Break | Break | Break | Break |
| 16:00 |
Quantification
Christoph Wichmann |
MaxDIA Tutorial
Hamid Hamzeiy |
Ion Mobility
Jürgen Cox |
Perseus intermediate
Daniela Ferretti |
Dynamic organellar maps go ultra-sensitive and high-throughput with MaxDIA
Vincent Albrecht & Julia Schessner |
| 16:45 |
Advanced identification strategies
Pelagia Kyriakidou |
Output tables
Béla Frohn |
De novo sequencing
Jürgen Cox |
Perseus Computational PTM proteomics
Şule Yılmaz-Rumpf |
Q&A
Jürgen Cox |
| 17:30 | Break | Break | Break | Break | Break |
| 18:00 |
Q&A
Jürgen Cox |
Reimagining Fragment-Based, Reactive-Cysteine Profiling
Steven P. Gygi |
Plenary talk
Joshua J. Coon |
Translating proteomic data into biological knowledge: Implications for experimental design
Ruedi Aebersold |
Computational opportunities for single-cell proteomics
Nikolai Slavov |
| 18:45 |
MaxQuant.Live
Christoph Wichmann |
Isobaric labeling
Sung-Huan Yu |
Grandpep
Petra Gutenbrunner |
Perseus Interactions & networks
Shivani Tiwary |
Current developments
Béla Frohn |
| 19:30 | Questions - open mic | Questions - open mic | Questions - open mic | Questions - open mic | Questions - open mic |
Schedule for time zone UTC+4
| Time/Day | Monday, June 21 | Tuesday, June 22 | Wednesday, June 23 | Thursday, June 24 | Friday, June 25 |
|---|---|---|---|---|---|
| 14:45 |
Welcome
Jürgen Cox |
||||
| 15:00 |
Typical proteomics experiments
Jürgen Cox |
MaxDIA
Jürgen Cox |
PTMs
Şule Yılmaz-Rumpf |
Perseus introduction
Jürgen Cox |
Cross Linking
Şule Yılmaz-Rumpf |
| 15:45 |
Identification
Pelagia Kyriakidou |
MaxDIA II
Pavel Sinitcyn |
NGS
Pavel Sinitcyn |
Perseus basics
Franziska Traube |
Perseus Plug-in programming
Pavel Sinitcyn |
| 16:30 | Break | Break | Break | Break | Break |
| 17:00 |
Quantification
Christoph Wichmann |
MaxDIA Tutorial
Hamid Hamzeiy |
Ion Mobility
Jürgen Cox |
Perseus intermediate
Daniela Ferretti |
Dynamic organellar maps go ultra-sensitive and high-throughput with MaxDIA
Vincent Albrecht & Julia Schessner |
| 17:45 |
Advanced identification strategies
Pelagia Kyriakidou |
Output tables
Béla Frohn |
De novo sequencing
Jürgen Cox |
Perseus Computational PTM proteomics
Şule Yılmaz-Rumpf |
Q&A
Jürgen Cox |
| 18:30 | Break | Break | Break | Break | Break |
| 19:00 |
Q&A
Jürgen Cox |
Reimagining Fragment-Based, Reactive-Cysteine Profiling
Steven P. Gygi |
Plenary talk
Joshua J. Coon |
Translating proteomic data into biological knowledge: Implications for experimental design
Ruedi Aebersold |
Computational opportunities for single-cell proteomics
Nikolai Slavov |
| 19:45 |
MaxQuant.Live
Christoph Wichmann |
Isobaric labeling
Sung-Huan Yu |
Grandpep
Petra Gutenbrunner |
Perseus Interactions & networks
Shivani Tiwary |
Current developments
Béla Frohn |
| 20:30 | Questions - open mic | Questions - open mic | Questions - open mic | Questions - open mic | Questions - open mic |
Schedule for time zone UTC+5
| Time/Day | Monday, June 21 | Tuesday, June 22 | Wednesday, June 23 | Thursday, June 24 | Friday, June 25 |
|---|---|---|---|---|---|
| 15:45 |
Welcome
Jürgen Cox |
||||
| 16:00 |
Typical proteomics experiments
Jürgen Cox |
MaxDIA
Jürgen Cox |
PTMs
Şule Yılmaz-Rumpf |
Perseus introduction
Jürgen Cox |
Cross Linking
Şule Yılmaz-Rumpf |
| 16:45 |
Identification
Pelagia Kyriakidou |
MaxDIA II
Pavel Sinitcyn |
NGS
Pavel Sinitcyn |
Perseus basics
Franziska Traube |
Perseus Plug-in programming
Pavel Sinitcyn |
| 17:30 | Break | Break | Break | Break | Break |
| 18:00 |
Quantification
Christoph Wichmann |
MaxDIA Tutorial
Hamid Hamzeiy |
Ion Mobility
Jürgen Cox |
Perseus intermediate
Daniela Ferretti |
Dynamic organellar maps go ultra-sensitive and high-throughput with MaxDIA
Vincent Albrecht & Julia Schessner |
| 18:45 |
Advanced identification strategies
Pelagia Kyriakidou |
Output tables
Béla Frohn |
De novo sequencing
Jürgen Cox |
Perseus Computational PTM proteomics
Şule Yılmaz-Rumpf |
Q&A
Jürgen Cox |
| 19:30 | Break | Break | Break | Break | Break |
| 20:00 |
Q&A
Jürgen Cox |
Reimagining Fragment-Based, Reactive-Cysteine Profiling
Steven P. Gygi |
Plenary talk
Joshua J. Coon |
Translating proteomic data into biological knowledge: Implications for experimental design
Ruedi Aebersold |
Computational opportunities for single-cell proteomics
Nikolai Slavov |
| 20:45 |
MaxQuant.Live
Christoph Wichmann |
Isobaric labeling
Sung-Huan Yu |
Grandpep
Petra Gutenbrunner |
Perseus Interactions & networks
Shivani Tiwary |
Current developments
Béla Frohn |
| 21:30 | Questions - open mic | Questions - open mic | Questions - open mic | Questions - open mic | Questions - open mic |
Schedule for time zone UTC+6
| Time/Day | Monday, June 21 | Tuesday, June 22 | Wednesday, June 23 | Thursday, June 24 | Friday, June 25 |
|---|---|---|---|---|---|
| 16:45 |
Welcome
Jürgen Cox |
||||
| 17:00 |
Typical proteomics experiments
Jürgen Cox |
MaxDIA
Jürgen Cox |
PTMs
Şule Yılmaz-Rumpf |
Perseus introduction
Jürgen Cox |
Cross Linking
Şule Yılmaz-Rumpf |
| 17:45 |
Identification
Pelagia Kyriakidou |
MaxDIA II
Pavel Sinitcyn |
NGS
Pavel Sinitcyn |
Perseus basics
Franziska Traube |
Perseus Plug-in programming
Pavel Sinitcyn |
| 18:30 | Break | Break | Break | Break | Break |
| 19:00 |
Quantification
Christoph Wichmann |
MaxDIA Tutorial
Hamid Hamzeiy |
Ion Mobility
Jürgen Cox |
Perseus intermediate
Daniela Ferretti |
Dynamic organellar maps go ultra-sensitive and high-throughput with MaxDIA
Vincent Albrecht & Julia Schessner |
| 19:45 |
Advanced identification strategies
Pelagia Kyriakidou |
Output tables
Béla Frohn |
De novo sequencing
Jürgen Cox |
Perseus Computational PTM proteomics
Şule Yılmaz-Rumpf |
Q&A
Jürgen Cox |
| 20:30 | Break | Break | Break | Break | Break |
| 21:00 |
Q&A
Jürgen Cox |
Reimagining Fragment-Based, Reactive-Cysteine Profiling
Steven P. Gygi |
Plenary talk
Joshua J. Coon |
Translating proteomic data into biological knowledge: Implications for experimental design
Ruedi Aebersold |
Computational opportunities for single-cell proteomics
Nikolai Slavov |
| 21:45 |
MaxQuant.Live
Christoph Wichmann |
Isobaric labeling
Sung-Huan Yu |
Grandpep
Petra Gutenbrunner |
Perseus Interactions & networks
Shivani Tiwary |
Current developments
Béla Frohn |
| 22:30 | Questions - open mic | Questions - open mic | Questions - open mic | Questions - open mic | Questions - open mic |
Schedule for time zone UTC+7
| Time/Day | Monday, June 21 | Tuesday, June 22 | Wednesday, June 23 | Thursday, June 24 | Friday, June 25 |
|---|---|---|---|---|---|
| 17:45 |
Welcome
Jürgen Cox |
||||
| 18:00 |
Typical proteomics experiments
Jürgen Cox |
MaxDIA
Jürgen Cox |
PTMs
Şule Yılmaz-Rumpf |
Perseus introduction
Jürgen Cox |
Cross Linking
Şule Yılmaz-Rumpf |
| 18:45 |
Identification
Pelagia Kyriakidou |
MaxDIA II
Pavel Sinitcyn |
NGS
Pavel Sinitcyn |
Perseus basics
Franziska Traube |
Perseus Plug-in programming
Pavel Sinitcyn |
| 19:30 | Break | Break | Break | Break | Break |
| 20:00 |
Quantification
Christoph Wichmann |
MaxDIA Tutorial
Hamid Hamzeiy |
Ion Mobility
Jürgen Cox |
Perseus intermediate
Daniela Ferretti |
Dynamic organellar maps go ultra-sensitive and high-throughput with MaxDIA
Vincent Albrecht & Julia Schessner |
| 20:45 |
Advanced identification strategies
Pelagia Kyriakidou |
Output tables
Béla Frohn |
De novo sequencing
Jürgen Cox |
Perseus Computational PTM proteomics
Şule Yılmaz-Rumpf |
Q&A
Jürgen Cox |
| 21:30 | Break | Break | Break | Break | Break |
| 22:00 |
Q&A
Jürgen Cox |
Reimagining Fragment-Based, Reactive-Cysteine Profiling
Steven P. Gygi |
Plenary talk
Joshua J. Coon |
Translating proteomic data into biological knowledge: Implications for experimental design
Ruedi Aebersold |
Computational opportunities for single-cell proteomics
Nikolai Slavov |
| 22:45 |
MaxQuant.Live
Christoph Wichmann |
Isobaric labeling
Sung-Huan Yu |
Grandpep
Petra Gutenbrunner |
Perseus Interactions & networks
Shivani Tiwary |
Current developments
Béla Frohn |
| 23:30 | Questions - open mic | Questions - open mic | Questions - open mic | Questions - open mic | Questions - open mic |
Schedule for time zone UTC+8
| Time/Day | Monday, June 21 | Tuesday, June 22 | Wednesday, June 23 | Thursday, June 24 | Friday, June 25 | Saturday, June 26 |
|---|---|---|---|---|---|---|
| 00:30 |
|
Questions - open mic | Questions - open mic | Questions - open mic | Questions - open mic | Questions - open mic |
| 18:45 |
Welcome
Jürgen Cox |
|
||||
| 19:00 |
Typical proteomics experiments
Jürgen Cox |
MaxDIA
Jürgen Cox |
PTMs
Şule Yılmaz-Rumpf |
Perseus introduction
Jürgen Cox |
Cross Linking
Şule Yılmaz-Rumpf |
|
| 19:45 |
Identification
Pelagia Kyriakidou |
MaxDIA II
Pavel Sinitcyn |
NGS
Pavel Sinitcyn |
Perseus basics
Franziska Traube |
Perseus Plug-in programming
Pavel Sinitcyn |
|
| 20:30 | Break | Break | Break | Break | Break |
|
| 21:00 |
Quantification
Christoph Wichmann |
MaxDIA Tutorial
Hamid Hamzeiy |
Ion Mobility
Jürgen Cox |
Perseus intermediate
Daniela Ferretti |
Dynamic organellar maps go ultra-sensitive and high-throughput with MaxDIA
Vincent Albrecht & Julia Schessner |
|
| 21:45 |
Advanced identification strategies
Pelagia Kyriakidou |
Output tables
Béla Frohn |
De novo sequencing
Jürgen Cox |
Perseus Computational PTM proteomics
Şule Yılmaz-Rumpf |
Q&A
Jürgen Cox |
|
| 22:30 | Break | Break | Break | Break | Break |
|
| 23:00 |
Q&A
Jürgen Cox |
Reimagining Fragment-Based, Reactive-Cysteine Profiling
Steven P. Gygi |
Plenary talk
Joshua J. Coon |
Translating proteomic data into biological knowledge: Implications for experimental design
Ruedi Aebersold |
Computational opportunities for single-cell proteomics
Nikolai Slavov |
|
| 23:45 |
MaxQuant.Live
Christoph Wichmann |
Isobaric labeling
Sung-Huan Yu |
Grandpep
Petra Gutenbrunner |
Perseus Interactions & networks
Shivani Tiwary |
Current developments
Béla Frohn |
|
Schedule for time zone UTC+9
| Time/Day | Monday, June 21 | Tuesday, June 22 | Wednesday, June 23 | Thursday, June 24 | Friday, June 25 | Saturday, June 26 |
|---|---|---|---|---|---|---|
| 00:00 |
|
Q&A
Jürgen Cox |
Reimagining Fragment-Based, Reactive-Cysteine Profiling
Steven P. Gygi |
Plenary talk
Joshua J. Coon |
Translating proteomic data into biological knowledge: Implications for experimental design
Ruedi Aebersold |
Computational opportunities for single-cell proteomics
Nikolai Slavov |
| 00:45 |
|
MaxQuant.Live
Christoph Wichmann |
Isobaric labeling
Sung-Huan Yu |
Grandpep
Petra Gutenbrunner |
Perseus Interactions & networks
Shivani Tiwary |
Current developments
Béla Frohn |
| 01:30 |
|
Questions - open mic | Questions - open mic | Questions - open mic | Questions - open mic | Questions - open mic |
| 19:45 |
Welcome
Jürgen Cox |
|
||||
| 20:00 |
Typical proteomics experiments
Jürgen Cox |
MaxDIA
Jürgen Cox |
PTMs
Şule Yılmaz-Rumpf |
Perseus introduction
Jürgen Cox |
Cross Linking
Şule Yılmaz-Rumpf |
|
| 20:45 |
Identification
Pelagia Kyriakidou |
MaxDIA II
Pavel Sinitcyn |
NGS
Pavel Sinitcyn |
Perseus basics
Franziska Traube |
Perseus Plug-in programming
Pavel Sinitcyn |
|
| 21:30 | Break | Break | Break | Break | Break |
|
| 22:00 |
Quantification
Christoph Wichmann |
MaxDIA Tutorial
Hamid Hamzeiy |
Ion Mobility
Jürgen Cox |
Perseus intermediate
Daniela Ferretti |
Dynamic organellar maps go ultra-sensitive and high-throughput with MaxDIA
Vincent Albrecht & Julia Schessner |
|
| 22:45 |
Advanced identification strategies
Pelagia Kyriakidou |
Output tables
Béla Frohn |
De novo sequencing
Jürgen Cox |
Perseus Computational PTM proteomics
Şule Yılmaz-Rumpf |
Q&A
Jürgen Cox |
|
| 23:30 | Break | Break | Break | Break | Break |
|
Schedule for time zone UTC+10
| Time/Day | Monday, June 21 | Tuesday, June 22 | Wednesday, June 23 | Thursday, June 24 | Friday, June 25 | Saturday, June 26 |
|---|---|---|---|---|---|---|
| 00:30 |
|
Break | Break | Break | Break | Break |
| 01:00 |
|
Q&A
Jürgen Cox |
Reimagining Fragment-Based, Reactive-Cysteine Profiling
Steven P. Gygi |
Plenary talk
Joshua J. Coon |
Translating proteomic data into biological knowledge: Implications for experimental design
Ruedi Aebersold |
Computational opportunities for single-cell proteomics
Nikolai Slavov |
| 01:45 |
|
MaxQuant.Live
Christoph Wichmann |
Isobaric labeling
Sung-Huan Yu |
Grandpep
Petra Gutenbrunner |
Perseus Interactions & networks
Shivani Tiwary |
Current developments
Béla Frohn |
| 02:30 |
|
Questions - open mic | Questions - open mic | Questions - open mic | Questions - open mic | Questions - open mic |
| 20:45 |
Welcome
Jürgen Cox |
|
||||
| 21:00 |
Typical proteomics experiments
Jürgen Cox |
MaxDIA
Jürgen Cox |
PTMs
Şule Yılmaz-Rumpf |
Perseus introduction
Jürgen Cox |
Cross Linking
Şule Yılmaz-Rumpf |
|
| 21:45 |
Identification
Pelagia Kyriakidou |
MaxDIA II
Pavel Sinitcyn |
NGS
Pavel Sinitcyn |
Perseus basics
Franziska Traube |
Perseus Plug-in programming
Pavel Sinitcyn |
|
| 22:30 | Break | Break | Break | Break | Break |
|
| 23:00 |
Quantification
Christoph Wichmann |
MaxDIA Tutorial
Hamid Hamzeiy |
Ion Mobility
Jürgen Cox |
Perseus intermediate
Daniela Ferretti |
Dynamic organellar maps go ultra-sensitive and high-throughput with MaxDIA
Vincent Albrecht & Julia Schessner |
|
| 23:45 |
Advanced identification strategies
Pelagia Kyriakidou |
Output tables
Béla Frohn |
De novo sequencing
Jürgen Cox |
Perseus Computational PTM proteomics
Şule Yılmaz-Rumpf |
Q&A
Jürgen Cox |
|
Schedule for time zone UTC+11
| Time/Day | Monday, June 21 | Tuesday, June 22 | Wednesday, June 23 | Thursday, June 24 | Friday, June 25 | Saturday, June 26 |
|---|---|---|---|---|---|---|
| 00:00 |
|
Quantification
Christoph Wichmann |
MaxDIA Tutorial
Hamid Hamzeiy |
Ion Mobility
Jürgen Cox |
Perseus intermediate
Daniela Ferretti |
Dynamic organellar maps go ultra-sensitive and high-throughput with MaxDIA
Vincent Albrecht & Julia Schessner |
| 00:45 |
|
Advanced identification strategies
Pelagia Kyriakidou |
Output tables
Béla Frohn |
De novo sequencing
Jürgen Cox |
Perseus Computational PTM proteomics
Şule Yılmaz-Rumpf |
Q&A
Jürgen Cox |
| 01:30 |
|
Break | Break | Break | Break | Break |
| 02:00 |
|
Q&A
Jürgen Cox |
Reimagining Fragment-Based, Reactive-Cysteine Profiling
Steven P. Gygi |
Plenary talk
Joshua J. Coon |
Translating proteomic data into biological knowledge: Implications for experimental design
Ruedi Aebersold |
Computational opportunities for single-cell proteomics
Nikolai Slavov |
| 02:45 |
|
MaxQuant.Live
Christoph Wichmann |
Isobaric labeling
Sung-Huan Yu |
Grandpep
Petra Gutenbrunner |
Perseus Interactions & networks
Shivani Tiwary |
Current developments
Béla Frohn |
| 03:30 |
|
Questions - open mic | Questions - open mic | Questions - open mic | Questions - open mic | Questions - open mic |
| 21:45 |
Welcome
Jürgen Cox |
|
||||
| 22:00 |
Typical proteomics experiments
Jürgen Cox |
MaxDIA
Jürgen Cox |
PTMs
Şule Yılmaz-Rumpf |
Perseus introduction
Jürgen Cox |
Cross Linking
Şule Yılmaz-Rumpf |
|
| 22:45 |
Identification
Pelagia Kyriakidou |
MaxDIA II
Pavel Sinitcyn |
NGS
Pavel Sinitcyn |
Perseus basics
Franziska Traube |
Perseus Plug-in programming
Pavel Sinitcyn |
|
| 23:30 | Break | Break | Break | Break | Break |
|
Organizers
Jürgen
Cox
Christoph
Wichmann
Şule
Yılmaz
Sung-Huan
Yu
Pelagia
Kyriakidou
Contact
Max-Planck-Institute of Biochemistry - Computational Systems Biochemistry
Am Klopferspitz 18, D-82152 Martinsried, Germany
+49 (0)89-8578 2088 or +49 (0)89-8578 2089
summerschool@maxquant.de