SummerSchool

The Summer School provides hands-on training in computational analysis of proteomics data generated by modern mass spectrometers. The practical parts will enable participants to perform sophisticated quantitative data analysis in their own future research using the publicly available MaxQuant and Perseus software.

Summer School 2021 will be online

Date: June 21 - 25, 2021
Location: Internet
Conference Fee: It's for free
Registration is open now!

Plenary speakers

Ruedi Aebersold
ETH Zürich

Joshua J. Coon
University of Wisconsin-Madison

Steven P. Gygi
Harvard Medical School

Nikolai Slavov
Northeastern University

Schedule for time zone UTC-12

Time/Day	Sunday, June 20	Monday, June 21	Tuesday, June 22	Wednesday, June 23	Thursday, June 24	Friday, June 25
00:30		Break	Break	Break	Break	Break
01:00		Quantification Christoph Wichmann	MaxDIA Tutorial Hamid Hamzeiy	Ion Mobility Jürgen Cox	Perseus II Pelagia Kyriakidou	Top down Christoph Wichmann
01:45		Advanced identification strategies Pelagia Kyriakidou	Output tables Béla Frohn	Metabolomics Franziska Traube	Perseus II tutorial Pelagia Kyriakidou	Q&A Jürgen Cox
02:30		Break	Break	Break	Break	Break
03:00		Q&A Jürgen Cox	Plenary talk tba	Plenary talk tba	Plenary talk Ruedi Aebersold	Plenary talk tba
03:45		MaxQuant.Live Christoph Wichmann	Isobaric labeling Sung-Huan Yu	Grandpep Petra Gutenbrunner	Perseus III tutorial Pavel Sinitcyn	Current develtopments Béla Frohn
04:30		Questions - open mic	Questions - open mic	Questions - open mic	Questions - open mic	Questions - open mic
22:45	Welcome Jürgen Cox
23:00	Typical proteomics experiments Jürgen Cox	MaxDIA Jürgen Cox	PTMs Şule Yılmaz-Rumpf	Perseus I Jürgen Cox	Cross Linking Şule Yılmaz-Rumpf
23:45	Identification Pelagia Kyriakidou	MaxDIA II Pavel Sinitcyn	NGS Pavel Sinitcyn	Perseus I tutorial Daniela Ferretti	Advanced MaxQuant tutorial Şule Yılmaz-Rumpf

Schedule for time zone UTC-11

Time/Day	Sunday, June 20	Monday, June 21	Tuesday, June 22	Wednesday, June 23	Thursday, June 24	Friday, June 25
00:00		Typical proteomics experiments Jürgen Cox	MaxDIA Jürgen Cox	PTMs Şule Yılmaz-Rumpf	Perseus I Jürgen Cox	Cross Linking Şule Yılmaz-Rumpf
00:45		Identification Pelagia Kyriakidou	MaxDIA II Pavel Sinitcyn	NGS Pavel Sinitcyn	Perseus I tutorial Daniela Ferretti	Advanced MaxQuant tutorial Şule Yılmaz-Rumpf
01:30		Break	Break	Break	Break	Break
02:00		Quantification Christoph Wichmann	MaxDIA Tutorial Hamid Hamzeiy	Ion Mobility Jürgen Cox	Perseus II Pelagia Kyriakidou	Top down Christoph Wichmann
02:45		Advanced identification strategies Pelagia Kyriakidou	Output tables Béla Frohn	Metabolomics Franziska Traube	Perseus II tutorial Pelagia Kyriakidou	Q&A Jürgen Cox
03:30		Break	Break	Break	Break	Break
04:00		Q&A Jürgen Cox	Plenary talk tba	Plenary talk tba	Plenary talk Ruedi Aebersold	Plenary talk tba
04:45		MaxQuant.Live Christoph Wichmann	Isobaric labeling Sung-Huan Yu	Grandpep Petra Gutenbrunner	Perseus III tutorial Pavel Sinitcyn	Current develtopments Béla Frohn
05:30		Questions - open mic	Questions - open mic	Questions - open mic	Questions - open mic	Questions - open mic
23:45	Welcome Jürgen Cox

Schedule for time zone UTC-10

Time/Day	Monday, June 21	Tuesday, June 22	Wednesday, June 23	Thursday, June 24	Friday, June 25
00:45	Welcome Jürgen Cox
01:00	Typical proteomics experiments Jürgen Cox	MaxDIA Jürgen Cox	PTMs Şule Yılmaz-Rumpf	Perseus I Jürgen Cox	Cross Linking Şule Yılmaz-Rumpf
01:45	Identification Pelagia Kyriakidou	MaxDIA II Pavel Sinitcyn	NGS Pavel Sinitcyn	Perseus I tutorial Daniela Ferretti	Advanced MaxQuant tutorial Şule Yılmaz-Rumpf
02:30	Break	Break	Break	Break	Break
03:00	Quantification Christoph Wichmann	MaxDIA Tutorial Hamid Hamzeiy	Ion Mobility Jürgen Cox	Perseus II Pelagia Kyriakidou	Top down Christoph Wichmann
03:45	Advanced identification strategies Pelagia Kyriakidou	Output tables Béla Frohn	Metabolomics Franziska Traube	Perseus II tutorial Pelagia Kyriakidou	Q&A Jürgen Cox
04:30	Break	Break	Break	Break	Break
05:00	Q&A Jürgen Cox	Plenary talk tba	Plenary talk tba	Plenary talk Ruedi Aebersold	Plenary talk tba
05:45	MaxQuant.Live Christoph Wichmann	Isobaric labeling Sung-Huan Yu	Grandpep Petra Gutenbrunner	Perseus III tutorial Pavel Sinitcyn	Current develtopments Béla Frohn
06:30	Questions - open mic	Questions - open mic	Questions - open mic	Questions - open mic	Questions - open mic

Schedule for time zone UTC-9

Time/Day	Monday, June 21	Tuesday, June 22	Wednesday, June 23	Thursday, June 24	Friday, June 25
01:45	Welcome Jürgen Cox
02:00	Typical proteomics experiments Jürgen Cox	MaxDIA Jürgen Cox	PTMs Şule Yılmaz-Rumpf	Perseus I Jürgen Cox	Cross Linking Şule Yılmaz-Rumpf
02:45	Identification Pelagia Kyriakidou	MaxDIA II Pavel Sinitcyn	NGS Pavel Sinitcyn	Perseus I tutorial Daniela Ferretti	Advanced MaxQuant tutorial Şule Yılmaz-Rumpf
03:30	Break	Break	Break	Break	Break
04:00	Quantification Christoph Wichmann	MaxDIA Tutorial Hamid Hamzeiy	Ion Mobility Jürgen Cox	Perseus II Pelagia Kyriakidou	Top down Christoph Wichmann
04:45	Advanced identification strategies Pelagia Kyriakidou	Output tables Béla Frohn	Metabolomics Franziska Traube	Perseus II tutorial Pelagia Kyriakidou	Q&A Jürgen Cox
05:30	Break	Break	Break	Break	Break
06:00	Q&A Jürgen Cox	Plenary talk tba	Plenary talk tba	Plenary talk Ruedi Aebersold	Plenary talk tba
06:45	MaxQuant.Live Christoph Wichmann	Isobaric labeling Sung-Huan Yu	Grandpep Petra Gutenbrunner	Perseus III tutorial Pavel Sinitcyn	Current develtopments Béla Frohn
07:30	Questions - open mic	Questions - open mic	Questions - open mic	Questions - open mic	Questions - open mic

Schedule for time zone UTC-8

Time/Day	Monday, June 21	Tuesday, June 22	Wednesday, June 23	Thursday, June 24	Friday, June 25
02:45	Welcome Jürgen Cox
03:00	Typical proteomics experiments Jürgen Cox	MaxDIA Jürgen Cox	PTMs Şule Yılmaz-Rumpf	Perseus I Jürgen Cox	Cross Linking Şule Yılmaz-Rumpf
03:45	Identification Pelagia Kyriakidou	MaxDIA II Pavel Sinitcyn	NGS Pavel Sinitcyn	Perseus I tutorial Daniela Ferretti	Advanced MaxQuant tutorial Şule Yılmaz-Rumpf
04:30	Break	Break	Break	Break	Break
05:00	Quantification Christoph Wichmann	MaxDIA Tutorial Hamid Hamzeiy	Ion Mobility Jürgen Cox	Perseus II Pelagia Kyriakidou	Top down Christoph Wichmann
05:45	Advanced identification strategies Pelagia Kyriakidou	Output tables Béla Frohn	Metabolomics Franziska Traube	Perseus II tutorial Pelagia Kyriakidou	Q&A Jürgen Cox
06:30	Break	Break	Break	Break	Break
07:00	Q&A Jürgen Cox	Plenary talk tba	Plenary talk tba	Plenary talk Ruedi Aebersold	Plenary talk tba
07:45	MaxQuant.Live Christoph Wichmann	Isobaric labeling Sung-Huan Yu	Grandpep Petra Gutenbrunner	Perseus III tutorial Pavel Sinitcyn	Current develtopments Béla Frohn
08:30	Questions - open mic	Questions - open mic	Questions - open mic	Questions - open mic	Questions - open mic

Schedule for time zone UTC-7

Time/Day	Monday, June 21	Tuesday, June 22	Wednesday, June 23	Thursday, June 24	Friday, June 25
03:45	Welcome Jürgen Cox
04:00	Typical proteomics experiments Jürgen Cox	MaxDIA Jürgen Cox	PTMs Şule Yılmaz-Rumpf	Perseus I Jürgen Cox	Cross Linking Şule Yılmaz-Rumpf
04:45	Identification Pelagia Kyriakidou	MaxDIA II Pavel Sinitcyn	NGS Pavel Sinitcyn	Perseus I tutorial Daniela Ferretti	Advanced MaxQuant tutorial Şule Yılmaz-Rumpf
05:30	Break	Break	Break	Break	Break
06:00	Quantification Christoph Wichmann	MaxDIA Tutorial Hamid Hamzeiy	Ion Mobility Jürgen Cox	Perseus II Pelagia Kyriakidou	Top down Christoph Wichmann
06:45	Advanced identification strategies Pelagia Kyriakidou	Output tables Béla Frohn	Metabolomics Franziska Traube	Perseus II tutorial Pelagia Kyriakidou	Q&A Jürgen Cox
07:30	Break	Break	Break	Break	Break
08:00	Q&A Jürgen Cox	Plenary talk tba	Plenary talk tba	Plenary talk Ruedi Aebersold	Plenary talk tba
08:45	MaxQuant.Live Christoph Wichmann	Isobaric labeling Sung-Huan Yu	Grandpep Petra Gutenbrunner	Perseus III tutorial Pavel Sinitcyn	Current develtopments Béla Frohn
09:30	Questions - open mic	Questions - open mic	Questions - open mic	Questions - open mic	Questions - open mic

Schedule for time zone UTC-6

Time/Day	Monday, June 21	Tuesday, June 22	Wednesday, June 23	Thursday, June 24	Friday, June 25
04:45	Welcome Jürgen Cox
05:00	Typical proteomics experiments Jürgen Cox	MaxDIA Jürgen Cox	PTMs Şule Yılmaz-Rumpf	Perseus I Jürgen Cox	Cross Linking Şule Yılmaz-Rumpf
05:45	Identification Pelagia Kyriakidou	MaxDIA II Pavel Sinitcyn	NGS Pavel Sinitcyn	Perseus I tutorial Daniela Ferretti	Advanced MaxQuant tutorial Şule Yılmaz-Rumpf
06:30	Break	Break	Break	Break	Break
07:00	Quantification Christoph Wichmann	MaxDIA Tutorial Hamid Hamzeiy	Ion Mobility Jürgen Cox	Perseus II Pelagia Kyriakidou	Top down Christoph Wichmann
07:45	Advanced identification strategies Pelagia Kyriakidou	Output tables Béla Frohn	Metabolomics Franziska Traube	Perseus II tutorial Pelagia Kyriakidou	Q&A Jürgen Cox
08:30	Break	Break	Break	Break	Break
09:00	Q&A Jürgen Cox	Plenary talk tba	Plenary talk tba	Plenary talk Ruedi Aebersold	Plenary talk tba
09:45	MaxQuant.Live Christoph Wichmann	Isobaric labeling Sung-Huan Yu	Grandpep Petra Gutenbrunner	Perseus III tutorial Pavel Sinitcyn	Current develtopments Béla Frohn
10:30	Questions - open mic	Questions - open mic	Questions - open mic	Questions - open mic	Questions - open mic

Schedule for time zone UTC-5

Time/Day	Monday, June 21	Tuesday, June 22	Wednesday, June 23	Thursday, June 24	Friday, June 25
05:45	Welcome Jürgen Cox
06:00	Typical proteomics experiments Jürgen Cox	MaxDIA Jürgen Cox	PTMs Şule Yılmaz-Rumpf	Perseus I Jürgen Cox	Cross Linking Şule Yılmaz-Rumpf
06:45	Identification Pelagia Kyriakidou	MaxDIA II Pavel Sinitcyn	NGS Pavel Sinitcyn	Perseus I tutorial Daniela Ferretti	Advanced MaxQuant tutorial Şule Yılmaz-Rumpf
07:30	Break	Break	Break	Break	Break
08:00	Quantification Christoph Wichmann	MaxDIA Tutorial Hamid Hamzeiy	Ion Mobility Jürgen Cox	Perseus II Pelagia Kyriakidou	Top down Christoph Wichmann
08:45	Advanced identification strategies Pelagia Kyriakidou	Output tables Béla Frohn	Metabolomics Franziska Traube	Perseus II tutorial Pelagia Kyriakidou	Q&A Jürgen Cox
09:30	Break	Break	Break	Break	Break
10:00	Q&A Jürgen Cox	Plenary talk tba	Plenary talk tba	Plenary talk Ruedi Aebersold	Plenary talk tba
10:45	MaxQuant.Live Christoph Wichmann	Isobaric labeling Sung-Huan Yu	Grandpep Petra Gutenbrunner	Perseus III tutorial Pavel Sinitcyn	Current develtopments Béla Frohn
11:30	Questions - open mic	Questions - open mic	Questions - open mic	Questions - open mic	Questions - open mic

Schedule for time zone UTC-4

Time/Day	Monday, June 21	Tuesday, June 22	Wednesday, June 23	Thursday, June 24	Friday, June 25
06:45	Welcome Jürgen Cox
07:00	Typical proteomics experiments Jürgen Cox	MaxDIA Jürgen Cox	PTMs Şule Yılmaz-Rumpf	Perseus I Jürgen Cox	Cross Linking Şule Yılmaz-Rumpf
07:45	Identification Pelagia Kyriakidou	MaxDIA II Pavel Sinitcyn	NGS Pavel Sinitcyn	Perseus I tutorial Daniela Ferretti	Advanced MaxQuant tutorial Şule Yılmaz-Rumpf
08:30	Break	Break	Break	Break	Break
09:00	Quantification Christoph Wichmann	MaxDIA Tutorial Hamid Hamzeiy	Ion Mobility Jürgen Cox	Perseus II Pelagia Kyriakidou	Top down Christoph Wichmann
09:45	Advanced identification strategies Pelagia Kyriakidou	Output tables Béla Frohn	Metabolomics Franziska Traube	Perseus II tutorial Pelagia Kyriakidou	Q&A Jürgen Cox
10:30	Break	Break	Break	Break	Break
11:00	Q&A Jürgen Cox	Plenary talk tba	Plenary talk tba	Plenary talk Ruedi Aebersold	Plenary talk tba
11:45	MaxQuant.Live Christoph Wichmann	Isobaric labeling Sung-Huan Yu	Grandpep Petra Gutenbrunner	Perseus III tutorial Pavel Sinitcyn	Current develtopments Béla Frohn
12:30	Questions - open mic	Questions - open mic	Questions - open mic	Questions - open mic	Questions - open mic

Schedule for time zone UTC-3

Time/Day	Monday, June 21	Tuesday, June 22	Wednesday, June 23	Thursday, June 24	Friday, June 25
07:45	Welcome Jürgen Cox
08:00	Typical proteomics experiments Jürgen Cox	MaxDIA Jürgen Cox	PTMs Şule Yılmaz-Rumpf	Perseus I Jürgen Cox	Cross Linking Şule Yılmaz-Rumpf
08:45	Identification Pelagia Kyriakidou	MaxDIA II Pavel Sinitcyn	NGS Pavel Sinitcyn	Perseus I tutorial Daniela Ferretti	Advanced MaxQuant tutorial Şule Yılmaz-Rumpf
09:30	Break	Break	Break	Break	Break
10:00	Quantification Christoph Wichmann	MaxDIA Tutorial Hamid Hamzeiy	Ion Mobility Jürgen Cox	Perseus II Pelagia Kyriakidou	Top down Christoph Wichmann
10:45	Advanced identification strategies Pelagia Kyriakidou	Output tables Béla Frohn	Metabolomics Franziska Traube	Perseus II tutorial Pelagia Kyriakidou	Q&A Jürgen Cox
11:30	Break	Break	Break	Break	Break
12:00	Q&A Jürgen Cox	Plenary talk tba	Plenary talk tba	Plenary talk Ruedi Aebersold	Plenary talk tba
12:45	MaxQuant.Live Christoph Wichmann	Isobaric labeling Sung-Huan Yu	Grandpep Petra Gutenbrunner	Perseus III tutorial Pavel Sinitcyn	Current develtopments Béla Frohn
13:30	Questions - open mic	Questions - open mic	Questions - open mic	Questions - open mic	Questions - open mic

Schedule for time zone UTC-2

Time/Day	Monday, June 21	Tuesday, June 22	Wednesday, June 23	Thursday, June 24	Friday, June 25
08:45	Welcome Jürgen Cox
09:00	Typical proteomics experiments Jürgen Cox	MaxDIA Jürgen Cox	PTMs Şule Yılmaz-Rumpf	Perseus I Jürgen Cox	Cross Linking Şule Yılmaz-Rumpf
09:45	Identification Pelagia Kyriakidou	MaxDIA II Pavel Sinitcyn	NGS Pavel Sinitcyn	Perseus I tutorial Daniela Ferretti	Advanced MaxQuant tutorial Şule Yılmaz-Rumpf
10:30	Break	Break	Break	Break	Break
11:00	Quantification Christoph Wichmann	MaxDIA Tutorial Hamid Hamzeiy	Ion Mobility Jürgen Cox	Perseus II Pelagia Kyriakidou	Top down Christoph Wichmann
11:45	Advanced identification strategies Pelagia Kyriakidou	Output tables Béla Frohn	Metabolomics Franziska Traube	Perseus II tutorial Pelagia Kyriakidou	Q&A Jürgen Cox
12:30	Break	Break	Break	Break	Break
13:00	Q&A Jürgen Cox	Plenary talk tba	Plenary talk tba	Plenary talk Ruedi Aebersold	Plenary talk tba
13:45	MaxQuant.Live Christoph Wichmann	Isobaric labeling Sung-Huan Yu	Grandpep Petra Gutenbrunner	Perseus III tutorial Pavel Sinitcyn	Current develtopments Béla Frohn
14:30	Questions - open mic	Questions - open mic	Questions - open mic	Questions - open mic	Questions - open mic

Schedule for time zone UTC-1

Time/Day	Monday, June 21	Tuesday, June 22	Wednesday, June 23	Thursday, June 24	Friday, June 25
09:45	Welcome Jürgen Cox
10:00	Typical proteomics experiments Jürgen Cox	MaxDIA Jürgen Cox	PTMs Şule Yılmaz-Rumpf	Perseus I Jürgen Cox	Cross Linking Şule Yılmaz-Rumpf
10:45	Identification Pelagia Kyriakidou	MaxDIA II Pavel Sinitcyn	NGS Pavel Sinitcyn	Perseus I tutorial Daniela Ferretti	Advanced MaxQuant tutorial Şule Yılmaz-Rumpf
11:30	Break	Break	Break	Break	Break
12:00	Quantification Christoph Wichmann	MaxDIA Tutorial Hamid Hamzeiy	Ion Mobility Jürgen Cox	Perseus II Pelagia Kyriakidou	Top down Christoph Wichmann
12:45	Advanced identification strategies Pelagia Kyriakidou	Output tables Béla Frohn	Metabolomics Franziska Traube	Perseus II tutorial Pelagia Kyriakidou	Q&A Jürgen Cox
13:30	Break	Break	Break	Break	Break
14:00	Q&A Jürgen Cox	Plenary talk tba	Plenary talk tba	Plenary talk Ruedi Aebersold	Plenary talk tba
14:45	MaxQuant.Live Christoph Wichmann	Isobaric labeling Sung-Huan Yu	Grandpep Petra Gutenbrunner	Perseus III tutorial Pavel Sinitcyn	Current develtopments Béla Frohn
15:30	Questions - open mic	Questions - open mic	Questions - open mic	Questions - open mic	Questions - open mic

Schedule for time zone UTC+0

Time/Day	Monday, June 21	Tuesday, June 22	Wednesday, June 23	Thursday, June 24	Friday, June 25
10:45	Welcome Jürgen Cox
11:00	Typical proteomics experiments Jürgen Cox	MaxDIA Jürgen Cox	PTMs Şule Yılmaz-Rumpf	Perseus I Jürgen Cox	Cross Linking Şule Yılmaz-Rumpf
11:45	Identification Pelagia Kyriakidou	MaxDIA II Pavel Sinitcyn	NGS Pavel Sinitcyn	Perseus I tutorial Daniela Ferretti	Advanced MaxQuant tutorial Şule Yılmaz-Rumpf
12:30	Break	Break	Break	Break	Break
13:00	Quantification Christoph Wichmann	MaxDIA Tutorial Hamid Hamzeiy	Ion Mobility Jürgen Cox	Perseus II Pelagia Kyriakidou	Top down Christoph Wichmann
13:45	Advanced identification strategies Pelagia Kyriakidou	Output tables Béla Frohn	Metabolomics Franziska Traube	Perseus II tutorial Pelagia Kyriakidou	Q&A Jürgen Cox
14:30	Break	Break	Break	Break	Break
15:00	Q&A Jürgen Cox	Plenary talk tba	Plenary talk tba	Plenary talk Ruedi Aebersold	Plenary talk tba
15:45	MaxQuant.Live Christoph Wichmann	Isobaric labeling Sung-Huan Yu	Grandpep Petra Gutenbrunner	Perseus III tutorial Pavel Sinitcyn	Current develtopments Béla Frohn
16:30	Questions - open mic	Questions - open mic	Questions - open mic	Questions - open mic	Questions - open mic

Schedule for time zone UTC+1

Time/Day	Monday, June 21	Tuesday, June 22	Wednesday, June 23	Thursday, June 24	Friday, June 25
11:45	Welcome Jürgen Cox
12:00	Typical proteomics experiments Jürgen Cox	MaxDIA Jürgen Cox	PTMs Şule Yılmaz-Rumpf	Perseus I Jürgen Cox	Cross Linking Şule Yılmaz-Rumpf
12:45	Identification Pelagia Kyriakidou	MaxDIA II Pavel Sinitcyn	NGS Pavel Sinitcyn	Perseus I tutorial Daniela Ferretti	Advanced MaxQuant tutorial Şule Yılmaz-Rumpf
13:30	Break	Break	Break	Break	Break
14:00	Quantification Christoph Wichmann	MaxDIA Tutorial Hamid Hamzeiy	Ion Mobility Jürgen Cox	Perseus II Pelagia Kyriakidou	Top down Christoph Wichmann
14:45	Advanced identification strategies Pelagia Kyriakidou	Output tables Béla Frohn	Metabolomics Franziska Traube	Perseus II tutorial Pelagia Kyriakidou	Q&A Jürgen Cox
15:30	Break	Break	Break	Break	Break
16:00	Q&A Jürgen Cox	Plenary talk tba	Plenary talk tba	Plenary talk Ruedi Aebersold	Plenary talk tba
16:45	MaxQuant.Live Christoph Wichmann	Isobaric labeling Sung-Huan Yu	Grandpep Petra Gutenbrunner	Perseus III tutorial Pavel Sinitcyn	Current develtopments Béla Frohn
17:30	Questions - open mic	Questions - open mic	Questions - open mic	Questions - open mic	Questions - open mic

Schedule for time zone UTC+2

Time/Day	Monday, June 21	Tuesday, June 22	Wednesday, June 23	Thursday, June 24	Friday, June 25
12:45	Welcome Jürgen Cox
13:00	Typical proteomics experiments Jürgen Cox	MaxDIA Jürgen Cox	PTMs Şule Yılmaz-Rumpf	Perseus I Jürgen Cox	Cross Linking Şule Yılmaz-Rumpf
13:45	Identification Pelagia Kyriakidou	MaxDIA II Pavel Sinitcyn	NGS Pavel Sinitcyn	Perseus I tutorial Daniela Ferretti	Advanced MaxQuant tutorial Şule Yılmaz-Rumpf
14:30	Break	Break	Break	Break	Break
15:00	Quantification Christoph Wichmann	MaxDIA Tutorial Hamid Hamzeiy	Ion Mobility Jürgen Cox	Perseus II Pelagia Kyriakidou	Top down Christoph Wichmann
15:45	Advanced identification strategies Pelagia Kyriakidou	Output tables Béla Frohn	Metabolomics Franziska Traube	Perseus II tutorial Pelagia Kyriakidou	Q&A Jürgen Cox
16:30	Break	Break	Break	Break	Break
17:00	Q&A Jürgen Cox	Plenary talk tba	Plenary talk tba	Plenary talk Ruedi Aebersold	Plenary talk tba
17:45	MaxQuant.Live Christoph Wichmann	Isobaric labeling Sung-Huan Yu	Grandpep Petra Gutenbrunner	Perseus III tutorial Pavel Sinitcyn	Current develtopments Béla Frohn
18:30	Questions - open mic	Questions - open mic	Questions - open mic	Questions - open mic	Questions - open mic

Schedule for time zone UTC+3

Time/Day	Monday, June 21	Tuesday, June 22	Wednesday, June 23	Thursday, June 24	Friday, June 25
13:45	Welcome Jürgen Cox
14:00	Typical proteomics experiments Jürgen Cox	MaxDIA Jürgen Cox	PTMs Şule Yılmaz-Rumpf	Perseus I Jürgen Cox	Cross Linking Şule Yılmaz-Rumpf
14:45	Identification Pelagia Kyriakidou	MaxDIA II Pavel Sinitcyn	NGS Pavel Sinitcyn	Perseus I tutorial Daniela Ferretti	Advanced MaxQuant tutorial Şule Yılmaz-Rumpf
15:30	Break	Break	Break	Break	Break
16:00	Quantification Christoph Wichmann	MaxDIA Tutorial Hamid Hamzeiy	Ion Mobility Jürgen Cox	Perseus II Pelagia Kyriakidou	Top down Christoph Wichmann
16:45	Advanced identification strategies Pelagia Kyriakidou	Output tables Béla Frohn	Metabolomics Franziska Traube	Perseus II tutorial Pelagia Kyriakidou	Q&A Jürgen Cox
17:30	Break	Break	Break	Break	Break
18:00	Q&A Jürgen Cox	Plenary talk tba	Plenary talk tba	Plenary talk Ruedi Aebersold	Plenary talk tba
18:45	MaxQuant.Live Christoph Wichmann	Isobaric labeling Sung-Huan Yu	Grandpep Petra Gutenbrunner	Perseus III tutorial Pavel Sinitcyn	Current develtopments Béla Frohn
19:30	Questions - open mic	Questions - open mic	Questions - open mic	Questions - open mic	Questions - open mic

Schedule for time zone UTC+4

Time/Day	Monday, June 21	Tuesday, June 22	Wednesday, June 23	Thursday, June 24	Friday, June 25
14:45	Welcome Jürgen Cox
15:00	Typical proteomics experiments Jürgen Cox	MaxDIA Jürgen Cox	PTMs Şule Yılmaz-Rumpf	Perseus I Jürgen Cox	Cross Linking Şule Yılmaz-Rumpf
15:45	Identification Pelagia Kyriakidou	MaxDIA II Pavel Sinitcyn	NGS Pavel Sinitcyn	Perseus I tutorial Daniela Ferretti	Advanced MaxQuant tutorial Şule Yılmaz-Rumpf
16:30	Break	Break	Break	Break	Break
17:00	Quantification Christoph Wichmann	MaxDIA Tutorial Hamid Hamzeiy	Ion Mobility Jürgen Cox	Perseus II Pelagia Kyriakidou	Top down Christoph Wichmann
17:45	Advanced identification strategies Pelagia Kyriakidou	Output tables Béla Frohn	Metabolomics Franziska Traube	Perseus II tutorial Pelagia Kyriakidou	Q&A Jürgen Cox
18:30	Break	Break	Break	Break	Break
19:00	Q&A Jürgen Cox	Plenary talk tba	Plenary talk tba	Plenary talk Ruedi Aebersold	Plenary talk tba
19:45	MaxQuant.Live Christoph Wichmann	Isobaric labeling Sung-Huan Yu	Grandpep Petra Gutenbrunner	Perseus III tutorial Pavel Sinitcyn	Current develtopments Béla Frohn
20:30	Questions - open mic	Questions - open mic	Questions - open mic	Questions - open mic	Questions - open mic

Schedule for time zone UTC+5

Time/Day	Monday, June 21	Tuesday, June 22	Wednesday, June 23	Thursday, June 24	Friday, June 25
15:45	Welcome Jürgen Cox
16:00	Typical proteomics experiments Jürgen Cox	MaxDIA Jürgen Cox	PTMs Şule Yılmaz-Rumpf	Perseus I Jürgen Cox	Cross Linking Şule Yılmaz-Rumpf
16:45	Identification Pelagia Kyriakidou	MaxDIA II Pavel Sinitcyn	NGS Pavel Sinitcyn	Perseus I tutorial Daniela Ferretti	Advanced MaxQuant tutorial Şule Yılmaz-Rumpf
17:30	Break	Break	Break	Break	Break
18:00	Quantification Christoph Wichmann	MaxDIA Tutorial Hamid Hamzeiy	Ion Mobility Jürgen Cox	Perseus II Pelagia Kyriakidou	Top down Christoph Wichmann
18:45	Advanced identification strategies Pelagia Kyriakidou	Output tables Béla Frohn	Metabolomics Franziska Traube	Perseus II tutorial Pelagia Kyriakidou	Q&A Jürgen Cox
19:30	Break	Break	Break	Break	Break
20:00	Q&A Jürgen Cox	Plenary talk tba	Plenary talk tba	Plenary talk Ruedi Aebersold	Plenary talk tba
20:45	MaxQuant.Live Christoph Wichmann	Isobaric labeling Sung-Huan Yu	Grandpep Petra Gutenbrunner	Perseus III tutorial Pavel Sinitcyn	Current develtopments Béla Frohn
21:30	Questions - open mic	Questions - open mic	Questions - open mic	Questions - open mic	Questions - open mic

Schedule for time zone UTC+6

Time/Day	Monday, June 21	Tuesday, June 22	Wednesday, June 23	Thursday, June 24	Friday, June 25
16:45	Welcome Jürgen Cox
17:00	Typical proteomics experiments Jürgen Cox	MaxDIA Jürgen Cox	PTMs Şule Yılmaz-Rumpf	Perseus I Jürgen Cox	Cross Linking Şule Yılmaz-Rumpf
17:45	Identification Pelagia Kyriakidou	MaxDIA II Pavel Sinitcyn	NGS Pavel Sinitcyn	Perseus I tutorial Daniela Ferretti	Advanced MaxQuant tutorial Şule Yılmaz-Rumpf
18:30	Break	Break	Break	Break	Break
19:00	Quantification Christoph Wichmann	MaxDIA Tutorial Hamid Hamzeiy	Ion Mobility Jürgen Cox	Perseus II Pelagia Kyriakidou	Top down Christoph Wichmann
19:45	Advanced identification strategies Pelagia Kyriakidou	Output tables Béla Frohn	Metabolomics Franziska Traube	Perseus II tutorial Pelagia Kyriakidou	Q&A Jürgen Cox
20:30	Break	Break	Break	Break	Break
21:00	Q&A Jürgen Cox	Plenary talk tba	Plenary talk tba	Plenary talk Ruedi Aebersold	Plenary talk tba
21:45	MaxQuant.Live Christoph Wichmann	Isobaric labeling Sung-Huan Yu	Grandpep Petra Gutenbrunner	Perseus III tutorial Pavel Sinitcyn	Current develtopments Béla Frohn
22:30	Questions - open mic	Questions - open mic	Questions - open mic	Questions - open mic	Questions - open mic

Schedule for time zone UTC+7

Time/Day	Monday, June 21	Tuesday, June 22	Wednesday, June 23	Thursday, June 24	Friday, June 25
17:45	Welcome Jürgen Cox
18:00	Typical proteomics experiments Jürgen Cox	MaxDIA Jürgen Cox	PTMs Şule Yılmaz-Rumpf	Perseus I Jürgen Cox	Cross Linking Şule Yılmaz-Rumpf
18:45	Identification Pelagia Kyriakidou	MaxDIA II Pavel Sinitcyn	NGS Pavel Sinitcyn	Perseus I tutorial Daniela Ferretti	Advanced MaxQuant tutorial Şule Yılmaz-Rumpf
19:30	Break	Break	Break	Break	Break
20:00	Quantification Christoph Wichmann	MaxDIA Tutorial Hamid Hamzeiy	Ion Mobility Jürgen Cox	Perseus II Pelagia Kyriakidou	Top down Christoph Wichmann
20:45	Advanced identification strategies Pelagia Kyriakidou	Output tables Béla Frohn	Metabolomics Franziska Traube	Perseus II tutorial Pelagia Kyriakidou	Q&A Jürgen Cox
21:30	Break	Break	Break	Break	Break
22:00	Q&A Jürgen Cox	Plenary talk tba	Plenary talk tba	Plenary talk Ruedi Aebersold	Plenary talk tba
22:45	MaxQuant.Live Christoph Wichmann	Isobaric labeling Sung-Huan Yu	Grandpep Petra Gutenbrunner	Perseus III tutorial Pavel Sinitcyn	Current develtopments Béla Frohn
23:30	Questions - open mic	Questions - open mic	Questions - open mic	Questions - open mic	Questions - open mic

Schedule for time zone UTC+8

Time/Day	Monday, June 21	Tuesday, June 22	Wednesday, June 23	Thursday, June 24	Friday, June 25	Saturday, June 26
00:30		Questions - open mic	Questions - open mic	Questions - open mic	Questions - open mic	Questions - open mic
18:45	Welcome Jürgen Cox
19:00	Typical proteomics experiments Jürgen Cox	MaxDIA Jürgen Cox	PTMs Şule Yılmaz-Rumpf	Perseus I Jürgen Cox	Cross Linking Şule Yılmaz-Rumpf
19:45	Identification Pelagia Kyriakidou	MaxDIA II Pavel Sinitcyn	NGS Pavel Sinitcyn	Perseus I tutorial Daniela Ferretti	Advanced MaxQuant tutorial Şule Yılmaz-Rumpf
20:30	Break	Break	Break	Break	Break
21:00	Quantification Christoph Wichmann	MaxDIA Tutorial Hamid Hamzeiy	Ion Mobility Jürgen Cox	Perseus II Pelagia Kyriakidou	Top down Christoph Wichmann
21:45	Advanced identification strategies Pelagia Kyriakidou	Output tables Béla Frohn	Metabolomics Franziska Traube	Perseus II tutorial Pelagia Kyriakidou	Q&A Jürgen Cox
22:30	Break	Break	Break	Break	Break
23:00	Q&A Jürgen Cox	Plenary talk tba	Plenary talk tba	Plenary talk Ruedi Aebersold	Plenary talk tba
23:45	MaxQuant.Live Christoph Wichmann	Isobaric labeling Sung-Huan Yu	Grandpep Petra Gutenbrunner	Perseus III tutorial Pavel Sinitcyn	Current develtopments Béla Frohn

Schedule for time zone UTC+9

Time/Day	Monday, June 21	Tuesday, June 22	Wednesday, June 23	Thursday, June 24	Friday, June 25	Saturday, June 26
00:00		Q&A Jürgen Cox	Plenary talk tba	Plenary talk tba	Plenary talk Ruedi Aebersold	Plenary talk tba
00:45		MaxQuant.Live Christoph Wichmann	Isobaric labeling Sung-Huan Yu	Grandpep Petra Gutenbrunner	Perseus III tutorial Pavel Sinitcyn	Current develtopments Béla Frohn
01:30		Questions - open mic	Questions - open mic	Questions - open mic	Questions - open mic	Questions - open mic
19:45	Welcome Jürgen Cox
20:00	Typical proteomics experiments Jürgen Cox	MaxDIA Jürgen Cox	PTMs Şule Yılmaz-Rumpf	Perseus I Jürgen Cox	Cross Linking Şule Yılmaz-Rumpf
20:45	Identification Pelagia Kyriakidou	MaxDIA II Pavel Sinitcyn	NGS Pavel Sinitcyn	Perseus I tutorial Daniela Ferretti	Advanced MaxQuant tutorial Şule Yılmaz-Rumpf
21:30	Break	Break	Break	Break	Break
22:00	Quantification Christoph Wichmann	MaxDIA Tutorial Hamid Hamzeiy	Ion Mobility Jürgen Cox	Perseus II Pelagia Kyriakidou	Top down Christoph Wichmann
22:45	Advanced identification strategies Pelagia Kyriakidou	Output tables Béla Frohn	Metabolomics Franziska Traube	Perseus II tutorial Pelagia Kyriakidou	Q&A Jürgen Cox
23:30	Break	Break	Break	Break	Break

Schedule for time zone UTC+10

Time/Day	Monday, June 21	Tuesday, June 22	Wednesday, June 23	Thursday, June 24	Friday, June 25	Saturday, June 26
00:30		Break	Break	Break	Break	Break
01:00		Q&A Jürgen Cox	Plenary talk tba	Plenary talk tba	Plenary talk Ruedi Aebersold	Plenary talk tba
01:45		MaxQuant.Live Christoph Wichmann	Isobaric labeling Sung-Huan Yu	Grandpep Petra Gutenbrunner	Perseus III tutorial Pavel Sinitcyn	Current develtopments Béla Frohn
02:30		Questions - open mic	Questions - open mic	Questions - open mic	Questions - open mic	Questions - open mic
20:45	Welcome Jürgen Cox
21:00	Typical proteomics experiments Jürgen Cox	MaxDIA Jürgen Cox	PTMs Şule Yılmaz-Rumpf	Perseus I Jürgen Cox	Cross Linking Şule Yılmaz-Rumpf
21:45	Identification Pelagia Kyriakidou	MaxDIA II Pavel Sinitcyn	NGS Pavel Sinitcyn	Perseus I tutorial Daniela Ferretti	Advanced MaxQuant tutorial Şule Yılmaz-Rumpf
22:30	Break	Break	Break	Break	Break
23:00	Quantification Christoph Wichmann	MaxDIA Tutorial Hamid Hamzeiy	Ion Mobility Jürgen Cox	Perseus II Pelagia Kyriakidou	Top down Christoph Wichmann
23:45	Advanced identification strategies Pelagia Kyriakidou	Output tables Béla Frohn	Metabolomics Franziska Traube	Perseus II tutorial Pelagia Kyriakidou	Q&A Jürgen Cox

Schedule for time zone UTC+11

Time/Day	Monday, June 21	Tuesday, June 22	Wednesday, June 23	Thursday, June 24	Friday, June 25	Saturday, June 26
00:00		Quantification Christoph Wichmann	MaxDIA Tutorial Hamid Hamzeiy	Ion Mobility Jürgen Cox	Perseus II Pelagia Kyriakidou	Top down Christoph Wichmann
00:45		Advanced identification strategies Pelagia Kyriakidou	Output tables Béla Frohn	Metabolomics Franziska Traube	Perseus II tutorial Pelagia Kyriakidou	Q&A Jürgen Cox
01:30		Break	Break	Break	Break	Break
02:00		Q&A Jürgen Cox	Plenary talk tba	Plenary talk tba	Plenary talk Ruedi Aebersold	Plenary talk tba
02:45		MaxQuant.Live Christoph Wichmann	Isobaric labeling Sung-Huan Yu	Grandpep Petra Gutenbrunner	Perseus III tutorial Pavel Sinitcyn	Current develtopments Béla Frohn
03:30		Questions - open mic	Questions - open mic	Questions - open mic	Questions - open mic	Questions - open mic
21:45	Welcome Jürgen Cox
22:00	Typical proteomics experiments Jürgen Cox	MaxDIA Jürgen Cox	PTMs Şule Yılmaz-Rumpf	Perseus I Jürgen Cox	Cross Linking Şule Yılmaz-Rumpf
22:45	Identification Pelagia Kyriakidou	MaxDIA II Pavel Sinitcyn	NGS Pavel Sinitcyn	Perseus I tutorial Daniela Ferretti	Advanced MaxQuant tutorial Şule Yılmaz-Rumpf
23:30	Break	Break	Break	Break	Break

Organizers

Jürgen
Cox

Christoph
Wichmann

Şule
Yılmaz

Sung-Huan
Yu

Pelagia
Kyriakidou

Contact

Max-Planck-Institute of Biochemistry - Computational Systems Biochemistry
Am Klopferspitz 18, D-82152 Martinsried, Germany
+49 (0)89-8578 2088 or +49 (0)89-8578 2089
summerschool@maxquant.de