The Summer School provides hands-on training in computational analysis of proteomics data generated by modern mass spectrometers. The practical parts will enable participants to perform sophisticated quantitative data analysis in their own future research using the publicly available MaxQuant and Perseus software.

MaxQuant Summer School 2023 will be in Boston, Massachusetts

Schedule for time zone UTC-12

Time/Day Monday, June 26 Tuesday, June 27 Wednesday, June 28 Thursday, June 29 Friday, June 30
01:00 Welcome MaxDIA I Output tables Perseus introduction NGS
01:45 Typical proteomics experiments MaxDIA II De novo sequencing Perseus basic tutorial I PTMs theory
02:30 Coffee break Coffee break Coffee break Coffee break Coffee break
03:00 MaxQuant basics I MaxDIA III MaxQuant.Live Perseus basic tutorial II Perseus PTM tutorial
03:45 MaxQuant basics II MaxQuant DIA tutorial MaxQuant atlas Perseus intermediate tutorial Perseus interactions & networks theory
04:30 Lunch Break Lunch break Lunch break Lunch break Lunch break
05:30 MaxQuant basics III Spectrum prediction Cross linking Isobaric labeling theory Perseus interactions & networks tutorial
06:15 MaxQuant DDA tutorial I Labeled quantification Plenary speaker Isobaric labeling tutorial I Question session
07:00 Coffee break Coffee break Coffee break Coffee break Concluding remarks
07:30 MaxQuant DDA tutorial II Label free quantification Question session Isobaric labeling tutorial II
08:15 Plenary speaker Plenary speaker Poster session Plenary speaker
09:00 Question session Question session Poster session Question session
12:00 Joint dinner

Schedule for time zone UTC-11

Time/Day Monday, June 26 Tuesday, June 27 Wednesday, June 28 Thursday, June 29 Friday, June 30
02:00 Welcome MaxDIA I Output tables Perseus introduction NGS
02:45 Typical proteomics experiments MaxDIA II De novo sequencing Perseus basic tutorial I PTMs theory
03:30 Coffee break Coffee break Coffee break Coffee break Coffee break
04:00 MaxQuant basics I MaxDIA III MaxQuant.Live Perseus basic tutorial II Perseus PTM tutorial
04:45 MaxQuant basics II MaxQuant DIA tutorial MaxQuant atlas Perseus intermediate tutorial Perseus interactions & networks theory
05:30 Lunch Break Lunch break Lunch break Lunch break Lunch break
06:30 MaxQuant basics III Spectrum prediction Cross linking Isobaric labeling theory Perseus interactions & networks tutorial
07:15 MaxQuant DDA tutorial I Labeled quantification Plenary speaker Isobaric labeling tutorial I Question session
08:00 Coffee break Coffee break Coffee break Coffee break Concluding remarks
08:30 MaxQuant DDA tutorial II Label free quantification Question session Isobaric labeling tutorial II
09:15 Plenary speaker Plenary speaker Poster session Plenary speaker
10:00 Question session Question session Poster session Question session
13:00 Joint dinner

Schedule for time zone UTC-10

Time/Day Monday, June 26 Tuesday, June 27 Wednesday, June 28 Thursday, June 29 Friday, June 30
03:00 Welcome MaxDIA I Output tables Perseus introduction NGS
03:45 Typical proteomics experiments MaxDIA II De novo sequencing Perseus basic tutorial I PTMs theory
04:30 Coffee break Coffee break Coffee break Coffee break Coffee break
05:00 MaxQuant basics I MaxDIA III MaxQuant.Live Perseus basic tutorial II Perseus PTM tutorial
05:45 MaxQuant basics II MaxQuant DIA tutorial MaxQuant atlas Perseus intermediate tutorial Perseus interactions & networks theory
06:30 Lunch Break Lunch break Lunch break Lunch break Lunch break
07:30 MaxQuant basics III Spectrum prediction Cross linking Isobaric labeling theory Perseus interactions & networks tutorial
08:15 MaxQuant DDA tutorial I Labeled quantification Plenary speaker Isobaric labeling tutorial I Question session
09:00 Coffee break Coffee break Coffee break Coffee break Concluding remarks
09:30 MaxQuant DDA tutorial II Label free quantification Question session Isobaric labeling tutorial II
10:15 Plenary speaker Plenary speaker Poster session Plenary speaker
11:00 Question session Question session Poster session Question session
14:00 Joint dinner

Schedule for time zone UTC-9

Time/Day Monday, June 26 Tuesday, June 27 Wednesday, June 28 Thursday, June 29 Friday, June 30
04:00 Welcome MaxDIA I Output tables Perseus introduction NGS
04:45 Typical proteomics experiments MaxDIA II De novo sequencing Perseus basic tutorial I PTMs theory
05:30 Coffee break Coffee break Coffee break Coffee break Coffee break
06:00 MaxQuant basics I MaxDIA III MaxQuant.Live Perseus basic tutorial II Perseus PTM tutorial
06:45 MaxQuant basics II MaxQuant DIA tutorial MaxQuant atlas Perseus intermediate tutorial Perseus interactions & networks theory
07:30 Lunch Break Lunch break Lunch break Lunch break Lunch break
08:30 MaxQuant basics III Spectrum prediction Cross linking Isobaric labeling theory Perseus interactions & networks tutorial
09:15 MaxQuant DDA tutorial I Labeled quantification Plenary speaker Isobaric labeling tutorial I Question session
10:00 Coffee break Coffee break Coffee break Coffee break Concluding remarks
10:30 MaxQuant DDA tutorial II Label free quantification Question session Isobaric labeling tutorial II
11:15 Plenary speaker Plenary speaker Poster session Plenary speaker
12:00 Question session Question session Poster session Question session
15:00 Joint dinner

Schedule for time zone UTC-8

Time/Day Monday, June 26 Tuesday, June 27 Wednesday, June 28 Thursday, June 29 Friday, June 30
05:00 Welcome MaxDIA I Output tables Perseus introduction NGS
05:45 Typical proteomics experiments MaxDIA II De novo sequencing Perseus basic tutorial I PTMs theory
06:30 Coffee break Coffee break Coffee break Coffee break Coffee break
07:00 MaxQuant basics I MaxDIA III MaxQuant.Live Perseus basic tutorial II Perseus PTM tutorial
07:45 MaxQuant basics II MaxQuant DIA tutorial MaxQuant atlas Perseus intermediate tutorial Perseus interactions & networks theory
08:30 Lunch Break Lunch break Lunch break Lunch break Lunch break
09:30 MaxQuant basics III Spectrum prediction Cross linking Isobaric labeling theory Perseus interactions & networks tutorial
10:15 MaxQuant DDA tutorial I Labeled quantification Plenary speaker Isobaric labeling tutorial I Question session
11:00 Coffee break Coffee break Coffee break Coffee break Concluding remarks
11:30 MaxQuant DDA tutorial II Label free quantification Question session Isobaric labeling tutorial II
12:15 Plenary speaker Plenary speaker Poster session Plenary speaker
13:00 Question session Question session Poster session Question session
16:00 Joint dinner

Schedule for time zone UTC-7

Time/Day Monday, June 26 Tuesday, June 27 Wednesday, June 28 Thursday, June 29 Friday, June 30
06:00 Welcome MaxDIA I Output tables Perseus introduction NGS
06:45 Typical proteomics experiments MaxDIA II De novo sequencing Perseus basic tutorial I PTMs theory
07:30 Coffee break Coffee break Coffee break Coffee break Coffee break
08:00 MaxQuant basics I MaxDIA III MaxQuant.Live Perseus basic tutorial II Perseus PTM tutorial
08:45 MaxQuant basics II MaxQuant DIA tutorial MaxQuant atlas Perseus intermediate tutorial Perseus interactions & networks theory
09:30 Lunch Break Lunch break Lunch break Lunch break Lunch break
10:30 MaxQuant basics III Spectrum prediction Cross linking Isobaric labeling theory Perseus interactions & networks tutorial
11:15 MaxQuant DDA tutorial I Labeled quantification Plenary speaker Isobaric labeling tutorial I Question session
12:00 Coffee break Coffee break Coffee break Coffee break Concluding remarks
12:30 MaxQuant DDA tutorial II Label free quantification Question session Isobaric labeling tutorial II
13:15 Plenary speaker Plenary speaker Poster session Plenary speaker
14:00 Question session Question session Poster session Question session
17:00 Joint dinner

Schedule for time zone UTC-6

Time/Day Monday, June 26 Tuesday, June 27 Wednesday, June 28 Thursday, June 29 Friday, June 30
07:00 Welcome MaxDIA I Output tables Perseus introduction NGS
07:45 Typical proteomics experiments MaxDIA II De novo sequencing Perseus basic tutorial I PTMs theory
08:30 Coffee break Coffee break Coffee break Coffee break Coffee break
09:00 MaxQuant basics I MaxDIA III MaxQuant.Live Perseus basic tutorial II Perseus PTM tutorial
09:45 MaxQuant basics II MaxQuant DIA tutorial MaxQuant atlas Perseus intermediate tutorial Perseus interactions & networks theory
10:30 Lunch Break Lunch break Lunch break Lunch break Lunch break
11:30 MaxQuant basics III Spectrum prediction Cross linking Isobaric labeling theory Perseus interactions & networks tutorial
12:15 MaxQuant DDA tutorial I Labeled quantification Plenary speaker Isobaric labeling tutorial I Question session
13:00 Coffee break Coffee break Coffee break Coffee break Concluding remarks
13:30 MaxQuant DDA tutorial II Label free quantification Question session Isobaric labeling tutorial II
14:15 Plenary speaker Plenary speaker Poster session Plenary speaker
15:00 Question session Question session Poster session Question session
18:00 Joint dinner

Schedule for time zone UTC-5

Time/Day Monday, June 26 Tuesday, June 27 Wednesday, June 28 Thursday, June 29 Friday, June 30
08:00 Welcome MaxDIA I Output tables Perseus introduction NGS
08:45 Typical proteomics experiments MaxDIA II De novo sequencing Perseus basic tutorial I PTMs theory
09:30 Coffee break Coffee break Coffee break Coffee break Coffee break
10:00 MaxQuant basics I MaxDIA III MaxQuant.Live Perseus basic tutorial II Perseus PTM tutorial
10:45 MaxQuant basics II MaxQuant DIA tutorial MaxQuant atlas Perseus intermediate tutorial Perseus interactions & networks theory
11:30 Lunch Break Lunch break Lunch break Lunch break Lunch break
12:30 MaxQuant basics III Spectrum prediction Cross linking Isobaric labeling theory Perseus interactions & networks tutorial
13:15 MaxQuant DDA tutorial I Labeled quantification Plenary speaker Isobaric labeling tutorial I Question session
14:00 Coffee break Coffee break Coffee break Coffee break Concluding remarks
14:30 MaxQuant DDA tutorial II Label free quantification Question session Isobaric labeling tutorial II
15:15 Plenary speaker Plenary speaker Poster session Plenary speaker
16:00 Question session Question session Poster session Question session
19:00 Joint dinner

Schedule for time zone UTC-4

Time/Day Monday, June 26 Tuesday, June 27 Wednesday, June 28 Thursday, June 29 Friday, June 30
09:00 Welcome MaxDIA I Output tables Perseus introduction NGS
09:45 Typical proteomics experiments MaxDIA II De novo sequencing Perseus basic tutorial I PTMs theory
10:30 Coffee break Coffee break Coffee break Coffee break Coffee break
11:00 MaxQuant basics I MaxDIA III MaxQuant.Live Perseus basic tutorial II Perseus PTM tutorial
11:45 MaxQuant basics II MaxQuant DIA tutorial MaxQuant atlas Perseus intermediate tutorial Perseus interactions & networks theory
12:30 Lunch Break Lunch break Lunch break Lunch break Lunch break
13:30 MaxQuant basics III Spectrum prediction Cross linking Isobaric labeling theory Perseus interactions & networks tutorial
14:15 MaxQuant DDA tutorial I Labeled quantification Plenary speaker Isobaric labeling tutorial I Question session
15:00 Coffee break Coffee break Coffee break Coffee break Concluding remarks
15:30 MaxQuant DDA tutorial II Label free quantification Question session Isobaric labeling tutorial II
16:15 Plenary speaker Plenary speaker Poster session Plenary speaker
17:00 Question session Question session Poster session Question session
20:00 Joint dinner

Schedule for time zone UTC-3

Time/Day Monday, June 26 Tuesday, June 27 Wednesday, June 28 Thursday, June 29 Friday, June 30
10:00 Welcome MaxDIA I Output tables Perseus introduction NGS
10:45 Typical proteomics experiments MaxDIA II De novo sequencing Perseus basic tutorial I PTMs theory
11:30 Coffee break Coffee break Coffee break Coffee break Coffee break
12:00 MaxQuant basics I MaxDIA III MaxQuant.Live Perseus basic tutorial II Perseus PTM tutorial
12:45 MaxQuant basics II MaxQuant DIA tutorial MaxQuant atlas Perseus intermediate tutorial Perseus interactions & networks theory
13:30 Lunch Break Lunch break Lunch break Lunch break Lunch break
14:30 MaxQuant basics III Spectrum prediction Cross linking Isobaric labeling theory Perseus interactions & networks tutorial
15:15 MaxQuant DDA tutorial I Labeled quantification Plenary speaker Isobaric labeling tutorial I Question session
16:00 Coffee break Coffee break Coffee break Coffee break Concluding remarks
16:30 MaxQuant DDA tutorial II Label free quantification Question session Isobaric labeling tutorial II
17:15 Plenary speaker Plenary speaker Poster session Plenary speaker
18:00 Question session Question session Poster session Question session
21:00 Joint dinner

Schedule for time zone UTC-2

Time/Day Monday, June 26 Tuesday, June 27 Wednesday, June 28 Thursday, June 29 Friday, June 30
11:00 Welcome MaxDIA I Output tables Perseus introduction NGS
11:45 Typical proteomics experiments MaxDIA II De novo sequencing Perseus basic tutorial I PTMs theory
12:30 Coffee break Coffee break Coffee break Coffee break Coffee break
13:00 MaxQuant basics I MaxDIA III MaxQuant.Live Perseus basic tutorial II Perseus PTM tutorial
13:45 MaxQuant basics II MaxQuant DIA tutorial MaxQuant atlas Perseus intermediate tutorial Perseus interactions & networks theory
14:30 Lunch Break Lunch break Lunch break Lunch break Lunch break
15:30 MaxQuant basics III Spectrum prediction Cross linking Isobaric labeling theory Perseus interactions & networks tutorial
16:15 MaxQuant DDA tutorial I Labeled quantification Plenary speaker Isobaric labeling tutorial I Question session
17:00 Coffee break Coffee break Coffee break Coffee break Concluding remarks
17:30 MaxQuant DDA tutorial II Label free quantification Question session Isobaric labeling tutorial II
18:15 Plenary speaker Plenary speaker Poster session Plenary speaker
19:00 Question session Question session Poster session Question session
22:00 Joint dinner

Schedule for time zone UTC-1

Time/Day Monday, June 26 Tuesday, June 27 Wednesday, June 28 Thursday, June 29 Friday, June 30
12:00 Welcome MaxDIA I Output tables Perseus introduction NGS
12:45 Typical proteomics experiments MaxDIA II De novo sequencing Perseus basic tutorial I PTMs theory
13:30 Coffee break Coffee break Coffee break Coffee break Coffee break
14:00 MaxQuant basics I MaxDIA III MaxQuant.Live Perseus basic tutorial II Perseus PTM tutorial
14:45 MaxQuant basics II MaxQuant DIA tutorial MaxQuant atlas Perseus intermediate tutorial Perseus interactions & networks theory
15:30 Lunch Break Lunch break Lunch break Lunch break Lunch break
16:30 MaxQuant basics III Spectrum prediction Cross linking Isobaric labeling theory Perseus interactions & networks tutorial
17:15 MaxQuant DDA tutorial I Labeled quantification Plenary speaker Isobaric labeling tutorial I Question session
18:00 Coffee break Coffee break Coffee break Coffee break Concluding remarks
18:30 MaxQuant DDA tutorial II Label free quantification Question session Isobaric labeling tutorial II
19:15 Plenary speaker Plenary speaker Poster session Plenary speaker
20:00 Question session Question session Poster session Question session
23:00 Joint dinner

Schedule for time zone UTC+0

Time/Day Monday, June 26 Tuesday, June 27 Wednesday, June 28 Thursday, June 29 Friday, June 30 Saturday, July 01
00:00
Joint dinner
13:00 Welcome MaxDIA I Output tables Perseus introduction NGS
13:45 Typical proteomics experiments MaxDIA II De novo sequencing Perseus basic tutorial I PTMs theory
14:30 Coffee break Coffee break Coffee break Coffee break Coffee break
15:00 MaxQuant basics I MaxDIA III MaxQuant.Live Perseus basic tutorial II Perseus PTM tutorial
15:45 MaxQuant basics II MaxQuant DIA tutorial MaxQuant atlas Perseus intermediate tutorial Perseus interactions & networks theory
16:30 Lunch Break Lunch break Lunch break Lunch break Lunch break
17:30 MaxQuant basics III Spectrum prediction Cross linking Isobaric labeling theory Perseus interactions & networks tutorial
18:15 MaxQuant DDA tutorial I Labeled quantification Plenary speaker Isobaric labeling tutorial I Question session
19:00 Coffee break Coffee break Coffee break Coffee break Concluding remarks
19:30 MaxQuant DDA tutorial II Label free quantification Question session Isobaric labeling tutorial II
20:15 Plenary speaker Plenary speaker Poster session Plenary speaker
21:00 Question session Question session Poster session Question session

Schedule for time zone UTC+1

Time/Day Monday, June 26 Tuesday, June 27 Wednesday, June 28 Thursday, June 29 Friday, June 30 Saturday, July 01
01:00
Joint dinner
14:00 Welcome MaxDIA I Output tables Perseus introduction NGS
14:45 Typical proteomics experiments MaxDIA II De novo sequencing Perseus basic tutorial I PTMs theory
15:30 Coffee break Coffee break Coffee break Coffee break Coffee break
16:00 MaxQuant basics I MaxDIA III MaxQuant.Live Perseus basic tutorial II Perseus PTM tutorial
16:45 MaxQuant basics II MaxQuant DIA tutorial MaxQuant atlas Perseus intermediate tutorial Perseus interactions & networks theory
17:30 Lunch Break Lunch break Lunch break Lunch break Lunch break
18:30 MaxQuant basics III Spectrum prediction Cross linking Isobaric labeling theory Perseus interactions & networks tutorial
19:15 MaxQuant DDA tutorial I Labeled quantification Plenary speaker Isobaric labeling tutorial I Question session
20:00 Coffee break Coffee break Coffee break Coffee break Concluding remarks
20:30 MaxQuant DDA tutorial II Label free quantification Question session Isobaric labeling tutorial II
21:15 Plenary speaker Plenary speaker Poster session Plenary speaker
22:00 Question session Question session Poster session Question session

Schedule for time zone UTC+2

Time/Day Monday, June 26 Tuesday, June 27 Wednesday, June 28 Thursday, June 29 Friday, June 30 Saturday, July 01
02:00
Joint dinner
15:00 Welcome MaxDIA I Output tables Perseus introduction NGS
15:45 Typical proteomics experiments MaxDIA II De novo sequencing Perseus basic tutorial I PTMs theory
16:30 Coffee break Coffee break Coffee break Coffee break Coffee break
17:00 MaxQuant basics I MaxDIA III MaxQuant.Live Perseus basic tutorial II Perseus PTM tutorial
17:45 MaxQuant basics II MaxQuant DIA tutorial MaxQuant atlas Perseus intermediate tutorial Perseus interactions & networks theory
18:30 Lunch Break Lunch break Lunch break Lunch break Lunch break
19:30 MaxQuant basics III Spectrum prediction Cross linking Isobaric labeling theory Perseus interactions & networks tutorial
20:15 MaxQuant DDA tutorial I Labeled quantification Plenary speaker Isobaric labeling tutorial I Question session
21:00 Coffee break Coffee break Coffee break Coffee break Concluding remarks
21:30 MaxQuant DDA tutorial II Label free quantification Question session Isobaric labeling tutorial II
22:15 Plenary speaker Plenary speaker Poster session Plenary speaker
23:00 Question session Question session Poster session Question session

Schedule for time zone UTC+3

Time/Day Monday, June 26 Tuesday, June 27 Wednesday, June 28 Thursday, June 29 Friday, June 30 Saturday, July 01
00:00
Question session Question session Poster session Question session
03:00
Joint dinner
16:00 Welcome MaxDIA I Output tables Perseus introduction NGS
16:45 Typical proteomics experiments MaxDIA II De novo sequencing Perseus basic tutorial I PTMs theory
17:30 Coffee break Coffee break Coffee break Coffee break Coffee break
18:00 MaxQuant basics I MaxDIA III MaxQuant.Live Perseus basic tutorial II Perseus PTM tutorial
18:45 MaxQuant basics II MaxQuant DIA tutorial MaxQuant atlas Perseus intermediate tutorial Perseus interactions & networks theory
19:30 Lunch Break Lunch break Lunch break Lunch break Lunch break
20:30 MaxQuant basics III Spectrum prediction Cross linking Isobaric labeling theory Perseus interactions & networks tutorial
21:15 MaxQuant DDA tutorial I Labeled quantification Plenary speaker Isobaric labeling tutorial I Question session
22:00 Coffee break Coffee break Coffee break Coffee break Concluding remarks
22:30 MaxQuant DDA tutorial II Label free quantification Question session Isobaric labeling tutorial II
23:15 Plenary speaker Plenary speaker Poster session Plenary speaker

Schedule for time zone UTC+4

Time/Day Monday, June 26 Tuesday, June 27 Wednesday, June 28 Thursday, June 29 Friday, June 30 Saturday, July 01
00:15
Plenary speaker Plenary speaker Poster session Plenary speaker
01:00
Question session Question session Poster session Question session
04:00
Joint dinner
17:00 Welcome MaxDIA I Output tables Perseus introduction NGS
17:45 Typical proteomics experiments MaxDIA II De novo sequencing Perseus basic tutorial I PTMs theory
18:30 Coffee break Coffee break Coffee break Coffee break Coffee break
19:00 MaxQuant basics I MaxDIA III MaxQuant.Live Perseus basic tutorial II Perseus PTM tutorial
19:45 MaxQuant basics II MaxQuant DIA tutorial MaxQuant atlas Perseus intermediate tutorial Perseus interactions & networks theory
20:30 Lunch Break Lunch break Lunch break Lunch break Lunch break
21:30 MaxQuant basics III Spectrum prediction Cross linking Isobaric labeling theory Perseus interactions & networks tutorial
22:15 MaxQuant DDA tutorial I Labeled quantification Plenary speaker Isobaric labeling tutorial I Question session
23:00 Coffee break Coffee break Coffee break Coffee break Concluding remarks
23:30 MaxQuant DDA tutorial II Label free quantification Question session Isobaric labeling tutorial II

Schedule for time zone UTC+5

Time/Day Monday, June 26 Tuesday, June 27 Wednesday, June 28 Thursday, June 29 Friday, June 30 Saturday, July 01
00:00
Coffee break Coffee break Coffee break Coffee break Concluding remarks
00:30
MaxQuant DDA tutorial II Label free quantification Question session Isobaric labeling tutorial II
01:15
Plenary speaker Plenary speaker Poster session Plenary speaker
02:00
Question session Question session Poster session Question session
05:00
Joint dinner
18:00 Welcome MaxDIA I Output tables Perseus introduction NGS
18:45 Typical proteomics experiments MaxDIA II De novo sequencing Perseus basic tutorial I PTMs theory
19:30 Coffee break Coffee break Coffee break Coffee break Coffee break
20:00 MaxQuant basics I MaxDIA III MaxQuant.Live Perseus basic tutorial II Perseus PTM tutorial
20:45 MaxQuant basics II MaxQuant DIA tutorial MaxQuant atlas Perseus intermediate tutorial Perseus interactions & networks theory
21:30 Lunch Break Lunch break Lunch break Lunch break Lunch break
22:30 MaxQuant basics III Spectrum prediction Cross linking Isobaric labeling theory Perseus interactions & networks tutorial
23:15 MaxQuant DDA tutorial I Labeled quantification Plenary speaker Isobaric labeling tutorial I Question session

Schedule for time zone UTC+6

Time/Day Monday, June 26 Tuesday, June 27 Wednesday, June 28 Thursday, June 29 Friday, June 30 Saturday, July 01
00:15
MaxQuant DDA tutorial I Labeled quantification Plenary speaker Isobaric labeling tutorial I Question session
01:00
Coffee break Coffee break Coffee break Coffee break Concluding remarks
01:30
MaxQuant DDA tutorial II Label free quantification Question session Isobaric labeling tutorial II
02:15
Plenary speaker Plenary speaker Poster session Plenary speaker
03:00
Question session Question session Poster session Question session
06:00
Joint dinner
19:00 Welcome MaxDIA I Output tables Perseus introduction NGS
19:45 Typical proteomics experiments MaxDIA II De novo sequencing Perseus basic tutorial I PTMs theory
20:30 Coffee break Coffee break Coffee break Coffee break Coffee break
21:00 MaxQuant basics I MaxDIA III MaxQuant.Live Perseus basic tutorial II Perseus PTM tutorial
21:45 MaxQuant basics II MaxQuant DIA tutorial MaxQuant atlas Perseus intermediate tutorial Perseus interactions & networks theory
22:30 Lunch Break Lunch break Lunch break Lunch break Lunch break
23:30 MaxQuant basics III Spectrum prediction Cross linking Isobaric labeling theory Perseus interactions & networks tutorial

Schedule for time zone UTC+7

Time/Day Monday, June 26 Tuesday, June 27 Wednesday, June 28 Thursday, June 29 Friday, June 30 Saturday, July 01
00:30
MaxQuant basics III Spectrum prediction Cross linking Isobaric labeling theory Perseus interactions & networks tutorial
01:15
MaxQuant DDA tutorial I Labeled quantification Plenary speaker Isobaric labeling tutorial I Question session
02:00
Coffee break Coffee break Coffee break Coffee break Concluding remarks
02:30
MaxQuant DDA tutorial II Label free quantification Question session Isobaric labeling tutorial II
03:15
Plenary speaker Plenary speaker Poster session Plenary speaker
04:00
Question session Question session Poster session Question session
07:00
Joint dinner
20:00 Welcome MaxDIA I Output tables Perseus introduction NGS
20:45 Typical proteomics experiments MaxDIA II De novo sequencing Perseus basic tutorial I PTMs theory
21:30 Coffee break Coffee break Coffee break Coffee break Coffee break
22:00 MaxQuant basics I MaxDIA III MaxQuant.Live Perseus basic tutorial II Perseus PTM tutorial
22:45 MaxQuant basics II MaxQuant DIA tutorial MaxQuant atlas Perseus intermediate tutorial Perseus interactions & networks theory
23:30 Lunch Break Lunch break Lunch break Lunch break Lunch break

Schedule for time zone UTC+8

Time/Day Monday, June 26 Tuesday, June 27 Wednesday, June 28 Thursday, June 29 Friday, June 30 Saturday, July 01
00:30
Lunch Break Lunch break Lunch break Lunch break Lunch break
01:30
MaxQuant basics III Spectrum prediction Cross linking Isobaric labeling theory Perseus interactions & networks tutorial
02:15
MaxQuant DDA tutorial I Labeled quantification Plenary speaker Isobaric labeling tutorial I Question session
03:00
Coffee break Coffee break Coffee break Coffee break Concluding remarks
03:30
MaxQuant DDA tutorial II Label free quantification Question session Isobaric labeling tutorial II
04:15
Plenary speaker Plenary speaker Poster session Plenary speaker
05:00
Question session Question session Poster session Question session
08:00
Joint dinner
21:00 Welcome MaxDIA I Output tables Perseus introduction NGS
21:45 Typical proteomics experiments MaxDIA II De novo sequencing Perseus basic tutorial I PTMs theory
22:30 Coffee break Coffee break Coffee break Coffee break Coffee break
23:00 MaxQuant basics I MaxDIA III MaxQuant.Live Perseus basic tutorial II Perseus PTM tutorial
23:45 MaxQuant basics II MaxQuant DIA tutorial MaxQuant atlas Perseus intermediate tutorial Perseus interactions & networks theory

Schedule for time zone UTC+9

Time/Day Monday, June 26 Tuesday, June 27 Wednesday, June 28 Thursday, June 29 Friday, June 30 Saturday, July 01
00:00
MaxQuant basics I MaxDIA III MaxQuant.Live Perseus basic tutorial II Perseus PTM tutorial
00:45
MaxQuant basics II MaxQuant DIA tutorial MaxQuant atlas Perseus intermediate tutorial Perseus interactions & networks theory
01:30
Lunch Break Lunch break Lunch break Lunch break Lunch break
02:30
MaxQuant basics III Spectrum prediction Cross linking Isobaric labeling theory Perseus interactions & networks tutorial
03:15
MaxQuant DDA tutorial I Labeled quantification Plenary speaker Isobaric labeling tutorial I Question session
04:00
Coffee break Coffee break Coffee break Coffee break Concluding remarks
04:30
MaxQuant DDA tutorial II Label free quantification Question session Isobaric labeling tutorial II
05:15
Plenary speaker Plenary speaker Poster session Plenary speaker
06:00
Question session Question session Poster session Question session
09:00
Joint dinner
22:00 Welcome MaxDIA I Output tables Perseus introduction NGS
22:45 Typical proteomics experiments MaxDIA II De novo sequencing Perseus basic tutorial I PTMs theory
23:30 Coffee break Coffee break Coffee break Coffee break Coffee break

Schedule for time zone UTC+10

Time/Day Monday, June 26 Tuesday, June 27 Wednesday, June 28 Thursday, June 29 Friday, June 30 Saturday, July 01
00:30
Coffee break Coffee break Coffee break Coffee break Coffee break
01:00
MaxQuant basics I MaxDIA III MaxQuant.Live Perseus basic tutorial II Perseus PTM tutorial
01:45
MaxQuant basics II MaxQuant DIA tutorial MaxQuant atlas Perseus intermediate tutorial Perseus interactions & networks theory
02:30
Lunch Break Lunch break Lunch break Lunch break Lunch break
03:30
MaxQuant basics III Spectrum prediction Cross linking Isobaric labeling theory Perseus interactions & networks tutorial
04:15
MaxQuant DDA tutorial I Labeled quantification Plenary speaker Isobaric labeling tutorial I Question session
05:00
Coffee break Coffee break Coffee break Coffee break Concluding remarks
05:30
MaxQuant DDA tutorial II Label free quantification Question session Isobaric labeling tutorial II
06:15
Plenary speaker Plenary speaker Poster session Plenary speaker
07:00
Question session Question session Poster session Question session
10:00
Joint dinner
23:00 Welcome MaxDIA I Output tables Perseus introduction NGS
23:45 Typical proteomics experiments MaxDIA II De novo sequencing Perseus basic tutorial I PTMs theory

Schedule for time zone UTC+11

Time/Day Tuesday, June 27 Wednesday, June 28 Thursday, June 29 Friday, June 30 Saturday, July 01
00:00 Welcome MaxDIA I Output tables Perseus introduction NGS
00:45 Typical proteomics experiments MaxDIA II De novo sequencing Perseus basic tutorial I PTMs theory
01:30 Coffee break Coffee break Coffee break Coffee break Coffee break
02:00 MaxQuant basics I MaxDIA III MaxQuant.Live Perseus basic tutorial II Perseus PTM tutorial
02:45 MaxQuant basics II MaxQuant DIA tutorial MaxQuant atlas Perseus intermediate tutorial Perseus interactions & networks theory
03:30 Lunch Break Lunch break Lunch break Lunch break Lunch break
04:30 MaxQuant basics III Spectrum prediction Cross linking Isobaric labeling theory Perseus interactions & networks tutorial
05:15 MaxQuant DDA tutorial I Labeled quantification Plenary speaker Isobaric labeling tutorial I Question session
06:00 Coffee break Coffee break Coffee break Coffee break Concluding remarks
06:30 MaxQuant DDA tutorial II Label free quantification Question session Isobaric labeling tutorial II
07:15 Plenary speaker Plenary speaker Poster session Plenary speaker
08:00 Question session Question session Poster session Question session
11:00 Joint dinner


Organizers

Card image

Jürgen Cox
MPI of Biochemistry

Card image

Nikolai Slavov
Northeastern University

Card image

Pelagia Kyriakidou
MPI of Biochemistry

Card image

Paulyna Mendoza
MPI of Biochemistry

Card image

Carlo De Nart
MPI of Biochemistry



Partner Organizations

Card image
CoxLab
Card image
MPI of Biochemistry
Card image
Northeastern University
Card image
Parallel Squared Technology Institute


Open position for Postdocs

Our group ( CoxLab ) is currently looking for Postdocs. If you have expertise in Computational Biology with a programming background and you want to join our group contact Jürgen Cox: cox@biochem.mpg.de


Contacts regarding the Summerschool

For questions send an e-mail to the following address: summerschool@maxquant.de

Physical address:
Max-Planck-Institute of Biochemistry - Computational Systems Biochemistry
Am Klopferspitz 18, D-82152 Martinsried, Germany