MaxQuant Summer School Videos

You can download here the most important videos about MaxQuant and Perseus.
If you want to see all videos, please visit our YouTube Channel.



MaxQuant


MQSS 2023 | MaxQuant DDA Basics 1 | Kyriakidou Pelagia
Frontal lecture on how MaxQuant analyses spectra.

MQSS 2023 | MaxQuant DDA Basics 2 | Kyriakidou Pelagia
Frontal lecture on how Andromeda-search identifies peptides.

MQSS 2023 | MaxQuant DDA Basics 3 | Kyriakidou Pelagia
Frontal lecture about which are the steps of a full MaxQuant run and how protein groups are generated.

MQSS 2023 | MaxQuant DDA Tutorial 1 | Dmitry Alexeev
Tutorial on how to run MaxQuant to analyze DDA data.

MQSS 2023 | MaxQuant DDA Tutorial 2 | Dmitry Alexeev
Tutorial on how to run MaxQuant in Linux, using the command line.

MQSS 2023 | MaxDIA 1 | Jürgen Cox
Frontal lecture on how MaxQuant and Andromeda analyze DIA data.

MQSS 2023 | MaxDIA 2 & new features | Jürgen Cox
Frontal lecture on how MaxDIA algorithm has been improved.

MQSS 2023 | MaxQuant DIA Tutorial | Shamil Urazbakhtin
Tutorial on how to change parameters in MaxQuant in order to analyze DIA data.

MQSS 2023 | MaxQuant Viewer | Shamil Urazbakhtin
Tutorial on how to use MaxQuant viewer: tool to visualize spectra, ions and peptides.



Perseus


MQSS 2023 | Perseus Introduction | Juan Luis Restrepo-López
Frontal lecture about Perseus: which statistical analyses can be done with it and how to.

MQSS 2023 | Perseus Basic Tutorial | Juan Luis Restrepo-López
Perseus tutorial: data cleaning, pre-processing and data visualization.

MQSS 2023 | Perseus Intermediate Tutorial | Juan Luis Restrepo-López
Perseus tutorial: statistical analyses, results interpretation and visualization.